RNA–Protein interactions for RNA: ENST00000528364.1

CLNS1A-210, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

APPRIS P1 TSL 3 BASIC

Gene CLNS1A, Length 953 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-210ENST00000528364 SLC7A6OSQ96CW6 309 aaPredicted RBP12.59□□□□□ -0.39
CLNS1A-210ENST00000528364 NRIP2Q9BQI9 281 aa12.59□□□□□ -0.39
CLNS1A-210ENST00000528364 ADGRL4Q9HBW9 690 aa12.59□□□□□ -0.39
CLNS1A-210ENST00000528364 TMEM14AQ9Y6G1 99 aa12.59□□□□□ -0.39
CLNS1A-210ENST00000528364 R4GMQ9 66 aa12.59□□□□□ -0.39
CLNS1A-210ENST00000528364 V9GYS6 101 aa12.59□□□□□ -0.39
CLNS1A-210ENST00000528364 PLXNB1O43157 2135 aa12.59□□□□□ -0.39
CLNS1A-210ENST00000528364 F8VVB4 439 aa12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 F8VWA3 439 aa12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 G3V4G9 280 aa12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 RPP14O95059 124 aaKnown RBP12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 PRB2P02812 416 aaPredicted RBP12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 VSIG10L2P0DP72 767 aa12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 DLX6P56179 175 aa12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 HABP2Q14520 560 aaPredicted RBP12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 LDLRAD2Q5SZI1 272 aa12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 BCL2L15Q5TBC7 163 aa12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 CCBE1Q6UXH8 406 aaPredicted RBP12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 SSX6Q7RTT6 188 aa12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 OR4C13Q8NGP0 309 aa12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 TRMT10AQ8TBZ6 339 aaKnown RBP12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 ITFG2Q969R8 447 aa12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 NRBF2Q96F24 287 aa12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 IL4I1Q96RQ9 567 aa12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 TBX5Q99593 518 aa12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 NKX3-1Q99801 234 aaPredicted RBP12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 HES4Q9HCC6 221 aa12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 H2AFY2Q9P0M6 372 aaPredicted RBP12.58□□□□□ -0.4
CLNS1A-210ENST00000528364 DLGAP1O14490 977 aa12.57□□□□□ -0.4
CLNS1A-210ENST00000528364 TK1P04183 234 aa12.57□□□□□ -0.4
CLNS1A-210ENST00000528364 HOXB6P17509 224 aaKnown RBP12.57□□□□□ -0.4
CLNS1A-210ENST00000528364 LGALS4P56470 323 aa12.57□□□□□ -0.4
CLNS1A-210ENST00000528364 ERVK11-1P61568 191 aa12.57□□□□□ -0.4
CLNS1A-210ENST00000528364 COL10A1Q03692 680 aa12.57□□□□□ -0.4
CLNS1A-210ENST00000528364 SLX4IPQ5VYV7 408 aa12.57□□□□□ -0.4
CLNS1A-210ENST00000528364 CFHR4Q92496 578 aa12.57□□□□□ -0.4
CLNS1A-210ENST00000528364 USE1Q9NZ43 259 aa12.57□□□□□ -0.4
CLNS1A-210ENST00000528364 IGKV1-27A0A075B6S5 117 aa12.56□□□□□ -0.4
CLNS1A-210ENST00000528364 FAM230AA0A1W2PPH8 454 aa12.56□□□□□ -0.4
CLNS1A-210ENST00000528364 FAM90A8PA6NJQ4 464 aa12.56□□□□□ -0.4
CLNS1A-210ENST00000528364 C17orf98A8MV24 154 aa12.56□□□□□ -0.4
CLNS1A-210ENST00000528364 ZNF670-ZNF695F2Z2N8 137 aa12.56□□□□□ -0.4
CLNS1A-210ENST00000528364 APOL3O95236 402 aa12.56□□□□□ -0.4
CLNS1A-210ENST00000528364 JUNBP17275 347 aaPredicted RBP12.56□□□□□ -0.4
CLNS1A-210ENST00000528364 MPZP25189 248 aa12.56□□□□□ -0.4
CLNS1A-210ENST00000528364 AANATQ16613 207 aa12.56□□□□□ -0.4
CLNS1A-210ENST00000528364 OR2T6Q8NHC8 308 aa12.56□□□□□ -0.4
CLNS1A-210ENST00000528364 TMEM163Q8TC26 289 aa12.56□□□□□ -0.4
CLNS1A-210ENST00000528364 DNAJC9Q8WXX5 260 aa12.56□□□□□ -0.4
CLNS1A-210ENST00000528364 CLN6Q9NWW5 311 aa12.56□□□□□ -0.4
CLNS1A-210ENST00000528364 MTCH1Q9NZJ7 389 aa12.56□□□□□ -0.4
CLNS1A-210ENST00000528364 POLDIP2Q9Y2S7 368 aa12.56□□□□□ -0.4
CLNS1A-210ENST00000528364 SNX5Q9Y5X3 404 aa12.56□□□□□ -0.4
CLNS1A-210ENST00000528364 A0A1W2PPH5 198 aa12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 ZAR1LA6NP61 321 aa12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 K7N7A8 449 aa12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 DNAJC8O75937 253 aaPredicted RBP12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 POLR2IP36954 125 aaKnown RBP12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 UBE2V2Q15819 145 aa12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 FAM189A2Q15884 450 aa12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 BEAN1Q3B7T3 259 aa12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 DNAL1Q4LDG9 190 aa12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 NXNL2Q5VZ03 156 aa12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 C12orf73Q69YU5 71 aa12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 Q6ZSR3 168 aa12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 TMEM219Q86XT9 240 aa12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 YIPF7Q8N8F6 280 aa12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 ASCC1Q8N9N2 400 aaKnown RBP12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 SLAMF9Q96A28 289 aa12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 CADM1Q9BY67 442 aaKnown RBP12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 NPFFR1Q9GZQ6 430 aa12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 ZNF702PQ9H963 129 aa12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 KRT84Q9NSB2 600 aa12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 DSCAML1Q8TD84 2053 aa12.55□□□□□ -0.4
CLNS1A-210ENST00000528364 hCG_1809904A0A1W2PP81 198 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 A0A1W2PPE2 198 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 A0A1W2PR64 198 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 A0A1W2PRV1 198 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 TMEM82A0PJX8 343 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 ZNF737O75373 536 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 OPN1MWP04001 364 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 ARG1P05089 322 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 OPN1MW2P0DN77 364 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 OPN1MW3P0DN78 364 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 CD28P10747 220 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 CCL1P22362 96 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 EDDM3BP56851 147 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 ACTR3P61158 418 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 SSX2Q16385 188 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 NSUN5P1Q3KNT7 163 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 Q6ZS46 218 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 AMIGO2Q86SJ2 522 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 CATSPERDQ86XM0 798 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 PKIBQ9C010 78 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 RANBP3Q9H6Z4 567 aaPredicted RBP12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 MOB1AQ9H8S9 216 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 RAB18Q9NP72 206 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 SERTAD4Q9NUC0 356 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 IL36RNQ9UBH0 155 aa12.54□□□□□ -0.4
CLNS1A-210ENST00000528364 KIAA2026Q5HYC2 2103 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms