RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 DLX6P56179 175 aa8.72□□□□□ -1.01
CD44-227ENST00000528086 GALEQ14376 348 aa8.72□□□□□ -1.01
CD44-227ENST00000528086 METAP1DQ6UB28 335 aaPredicted RBP8.72□□□□□ -1.01
CD44-227ENST00000528086 KIR3DL3Q8N743 410 aa8.72□□□□□ -1.01
CD44-227ENST00000528086 ZNF671Q8TAW3 534 aa8.72□□□□□ -1.01
CD44-227ENST00000528086 RPS4Y2Q8TD47 263 aa8.72□□□□□ -1.01
CD44-227ENST00000528086 GCDHQ92947 438 aaPredicted RBP8.72□□□□□ -1.01
CD44-227ENST00000528086 DMRTB1Q96MA1 342 aa8.72□□□□□ -1.01
CD44-227ENST00000528086 JMJD8Q96S16 334 aa8.72□□□□□ -1.01
CD44-227ENST00000528086 CHIAQ9BZP6 476 aa8.72□□□□□ -1.01
CD44-227ENST00000528086 PKIBQ9C010 78 aa8.72□□□□□ -1.01
CD44-227ENST00000528086 UNKLQ9H9P5 680 aaKnown RBP8.72□□□□□ -1.01
CD44-227ENST00000528086 ERVK13-1Q9NX77 482 aa8.72□□□□□ -1.01
CD44-227ENST00000528086 RASL12Q9NYN1 266 aa8.72□□□□□ -1.01
CD44-227ENST00000528086 VWFP04275 2813 aa8.72□□□□□ -1.01
CD44-227ENST00000528086 A0A1B0GVI7 797 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 FAM230AA0A1W2PPH8 454 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 TMEM82A0PJX8 343 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 J3QLW9 94 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 GPR37O15354 613 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 ZFPL1O95159 310 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 LALBAP00709 142 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 IGHV4-59P01825 116 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 ZNF19P17023 458 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 PAX6P26367 422 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 ETV1P50549 477 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 CCR9P51686 369 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 GTF2A1P52655 376 aaPredicted RBP8.71□□□□□ -1.02
CD44-227ENST00000528086 ACTG1P63261 375 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 IL24Q13007 206 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 ALKBH1Q13686 389 aaKnown RBP8.71□□□□□ -1.02
CD44-227ENST00000528086 ZNF273Q14593 569 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 LRRC36Q1X8D7 754 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 LRRC10Q5BKY1 277 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 LDLRAD2Q5SZI1 272 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 GPR157Q5UAW9 335 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 ZNF691Q5VV52 312 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 METTL11BQ5VVY1 283 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 TMEM200BQ69YZ2 307 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 C12orf54Q6X4T0 127 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 C17orf107Q6ZR85 190 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 ZNF573Q86YE8 665 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 ZNF485Q8NCK3 441 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 CNIH3Q8TBE1 160 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 H1FXQ92522 213 aaKnown RBP8.71□□□□□ -1.02
CD44-227ENST00000528086 SLAMF9Q96A28 289 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 FGGYQ96C11 551 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 MED30Q96HR3 178 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 ALG8Q9BVK2 526 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 FGF20Q9NP95 211 aaPredicted RBP8.71□□□□□ -1.02
CD44-227ENST00000528086 ONECUT1Q9UBC0 465 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 ORC6Q9Y5N6 252 aa8.71□□□□□ -1.02
CD44-227ENST00000528086 MGAM2Q2M2H8 2515 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 A0A1W2PRD5 423 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 A0A1W2PRF3 423 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 A0A1W2PRM7 423 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 MEX3AA1L020 520 aaKnown RBP8.7□□□□□ -1.02
CD44-227ENST00000528086 FAM181BA6NEQ2 426 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 NKX6-3A6NJ46 265 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 INMTO95050 263 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 GNAO1P09471 354 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 UBCP0CG48 685 aaKnown RBP8.7□□□□□ -1.02
CD44-227ENST00000528086 CALCBP10092 127 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 CCL3L1P16619 93 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 NDUFB7P17568 137 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 ATF1P18846 271 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 OMGP23515 440 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 BPIFB3P59826 476 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 KRTAP10-3P60369 221 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 ACTC1P68032 377 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 ACTA1P68133 377 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 PDCD1Q15116 288 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 TAF9Q16594 264 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 C16orf87Q6PH81 154 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 C1orf122Q6ZSJ8 110 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 SLC25A26Q70HW3 274 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 UTS2BQ765I0 119 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 KCTD20Q7Z5Y7 419 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 LDLRAD3Q86YD5 345 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 SYS1Q8N2H4 156 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 TMEM185AQ8NFB2 350 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 OR4M1Q8NGD0 313 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 OR52N4Q8NGI2 321 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 GATAD2BQ8WXI9 593 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 SPACA5Q96QH8 159 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 PDCD1LG2Q9BQ51 273 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 JAM3Q9BX67 310 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 TNFRSF19Q9NS68 423 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 RBFOX1Q9NWB1 397 aaKnown RBP8.7□□□□□ -1.02
CD44-227ENST00000528086 SMPD3Q9NY59 655 aaPredicted RBP8.7□□□□□ -1.02
CD44-227ENST00000528086 NKX1-2Q9UD57 310 aaPredicted RBP8.7□□□□□ -1.02
CD44-227ENST00000528086 CLEC2DQ9UHP7 191 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 PCDHGB1Q9Y5G3 927 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 WNK1Q9H4A3 2382 aa8.7□□□□□ -1.02
CD44-227ENST00000528086 K7N7A8 449 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 M0R1W7 72 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 SPRY1O43609 319 aaPredicted RBP8.69□□□□□ -1.02
CD44-227ENST00000528086 PSPNO60542 156 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 NXPH2O95156 264 aa8.69□□□□□ -1.02
CD44-227ENST00000528086 KNG1P01042 644 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms