RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 CIB2O75838 187 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 KRT8P05787 483 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 MPZP25189 248 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 POLR2IP36954 125 aaKnown RBP8.58□□□□□ -1.04
CPSF1-203ENST00000527916 KIR2DS4P43632 304 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 EFNB2P52799 333 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 GMFBP60983 142 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 ACSM1Q08AH1 577 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 BLMHQ13867 455 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 NSUN5P1Q3KNT7 163 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 DEFB121Q5J5C9 76 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 SLC25A30Q5SVS4 291 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 BCL2L15Q5TBC7 163 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 FOXB2Q5VYV0 432 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 PLCXD3Q63HM9 321 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 HAGHLQ6PII5 290 aaPredicted RBP8.58□□□□□ -1.04
CPSF1-203ENST00000527916 ACP7Q6ZNF0 438 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 ASRGL1Q7L266 308 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 ZNF561Q8N587 486 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 OR51G2Q8NGK0 314 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 H1FXQ92522 213 aaKnown RBP8.58□□□□□ -1.04
CPSF1-203ENST00000527916 TNFRSF14Q92956 283 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 RFKQ969G6 155 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 METTL8Q9H825 291 aaKnown RBP8.58□□□□□ -1.04
CPSF1-203ENST00000527916 ONECUT1Q9UBC0 465 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 OAZ3Q9UMX2 235 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 FOXJ3Q9UPW0 622 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 SLC22A13Q9Y226 551 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 POLDIP2Q9Y2S7 368 aa8.58□□□□□ -1.04
CPSF1-203ENST00000527916 A0A1W2PQL4 384 aaPredicted RBP8.57□□□□□ -1.04
CPSF1-203ENST00000527916 MAGEB4O15481 346 aaPredicted RBP8.57□□□□□ -1.04
CPSF1-203ENST00000527916 PGA5P0DJD9 388 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 SELLP14151 372 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 NDUFB7P17568 137 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 HAAOP46952 286 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 GABRA2P47869 451 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 UBE2E1P51965 193 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 CD69Q07108 199 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 SMIM21Q3B7S5 101 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 NCR3LG1Q68D85 454 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 SSX6Q7RTT6 188 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 KCTD20Q7Z5Y7 419 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 YIPF7Q8N8F6 280 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 ZNRF1Q8ND25 227 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 C10orf35Q96D05 121 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 R3HDM4Q96D70 268 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 TTTY10Q9BZA0 68 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 PKIBQ9C010 78 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 FAM234AQ9H0X4 552 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 SEMA6AQ9H2E6 1030 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 HES4Q9HCC6 221 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 RAB18Q9NP72 206 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.57□□□□□ -1.04
CPSF1-203ENST00000527916 SIGLEC9Q9Y336 463 aa8.57□□□□□ -1.04
CPSF1-203ENST00000527916 RFPL4AA6NLU0 287 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 E9PQ18 207 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 RFPL4AL1F8VTS6 287 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 NPFFO15130 113 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 FBXO24O75426 580 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 ALPLP05186 524 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 VSIG10L2P0DP72 767 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 PRDX2P32119 198 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 CDC42P60953 191 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 ISL1P61371 349 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 ERVK11-1P61568 191 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 IL24Q13007 206 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 DMRTC1Q5HYR2 192 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 PLEKHG7Q6ZR37 379 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 CATSPERDQ86XM0 798 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 CALHM1Q8IU99 346 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 EGFL6Q8IUX8 553 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 C10orf67Q8IYJ2 551 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 CD177Q8N6Q3 437 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 OR5D13Q8NGL4 314 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 RORBQ92753 470 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 EME1Q96AY2 570 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 HRASLS5Q96KN8 279 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 NRIP2Q9BQI9 281 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 MMP28Q9H239 520 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 RANBP3Q9H6Z4 567 aaPredicted RBP8.56□□□□□ -1.04
CPSF1-203ENST00000527916 SEBOXQ9HB31 216 aaPredicted RBP8.56□□□□□ -1.04
CPSF1-203ENST00000527916 SIRT7Q9NRC8 400 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 USE1Q9NZ43 259 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 GTF2A1LQ9UNN4 478 aa8.56□□□□□ -1.04
CPSF1-203ENST00000527916 DSCAML1Q8TD84 2053 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 DNAH9Q9NYC9 4486 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 A0A1W2PPH5 198 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 A0A1W2PQ09 198 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 MEIOCA2RUB1 952 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 K7EIL1 84 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 SLC1A7O00341 560 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 SYNGR1O43759 233 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 RPP14O95059 124 aaKnown RBP8.55□□□□□ -1.04
CPSF1-203ENST00000527916 TFF1P04155 84 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 CD33P20138 364 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 ATP6V1E1P36543 226 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 SNRPGP62308 76 aaKnown RBP8.55□□□□□ -1.04
CPSF1-203ENST00000527916 MEDAGQ5VYS4 303 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 ZFP1Q6P2D0 407 aa8.55□□□□□ -1.04
CPSF1-203ENST00000527916 FDX2Q6P4F2 183 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms