RNA–Protein interactions for RNA: ENST00000527889.5

CD44-226, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 543 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-226ENST00000527889 TRDV1A0A1B0GX56 115 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 RAB19A4D1S5 217 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 METTL15A6NJ78 407 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 PCP4L1A6NKN8 68 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 ANXA2P2A6NMY6 339 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 FAM157AC9JC47 383 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 MKRN2OSH3BPM6 223 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 K7ENP7 123 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 LGALS8O00214 317 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 GABRPO00591 440 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 OGG1O15527 345 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 NOS1APO75052 506 aaPredicted RBP3.61□□□□□ -1.83
CD44-226ENST00000527889 UPK3AO75631 287 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 CDRT1O95170 752 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 ACTL6AO96019 429 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 DHFRP00374 187 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 IGHV3-9P01782 118 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 IGHG3P01860 377 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 GSTT2P0CG29 244 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 GSTT2BP0CG30 244 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 ALOX5APP20292 161 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 PSMA1P25786 263 aaKnown RBP3.61□□□□□ -1.83
CD44-226ENST00000527889 LAP3P28838 519 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 GABRA5P31644 462 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 MC5RP33032 325 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 UGT2B10P36537 528 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 KIR3DL2P43630 455 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 SOX2P48431 317 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 TGM4P49221 684 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 CAV3P56539 151 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 TAS2R43P59537 309 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 NANOS3P60323 173 aaKnown RBP3.61□□□□□ -1.83
CD44-226ENST00000527889 SIRPAP78324 504 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 BDH1Q02338 343 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 HSF2Q03933 536 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 MFGE8Q08431 387 aaPredicted RBP3.61□□□□□ -1.83
CD44-226ENST00000527889 ACSM1Q08AH1 577 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 MAB21L1Q13394 359 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 ZNF273Q14593 569 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 HIST3H3Q16695 136 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 MOGAT2Q3SYC2 334 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 TIMM50Q3ZCQ8 353 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 C10orf128Q5T292 105 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 FAM27D1Q5T7N8 215 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 HES5Q5TA89 166 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 LIPNQ5VXI9 398 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 PLCXD3Q63HM9 321 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 DMKNQ6E0U4 476 aaPredicted RBP3.61□□□□□ -1.83
CD44-226ENST00000527889 SLC18B1Q6NT16 456 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 TMEM91Q6ZNR0 172 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 USP43Q70EL4 1123 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 LINGO2Q7L985 606 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 CHMP1BQ7LBR1 199 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 BHLHA15Q7RTS1 189 aaPredicted RBP3.61□□□□□ -1.83
CD44-226ENST00000527889 AAED1Q7RTV5 226 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 SMIM15Q7Z3B0 74 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 NUFIP2Q7Z417 695 aaKnown RBP3.61□□□□□ -1.83
CD44-226ENST00000527889 FAM220AQ7Z4H9 259 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 PEG10Q86TG7 708 aaKnown RBP3.61□□□□□ -1.83
CD44-226ENST00000527889 RTN4RL2Q86UN3 420 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 SIAH3Q8IW03 269 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 C20orf196Q8IYI0 205 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 TMEM123Q8N131 208 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 LRRC18Q8N456 261 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 KBTBD8Q8NFY9 601 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 OR10S1Q8NGN2 331 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 OR5M9Q8NGP3 310 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 OR52N5Q8NH56 324 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 RGP1Q92546 391 aaPredicted RBP3.61□□□□□ -1.83
CD44-226ENST00000527889 PNPLA2Q96AD5 504 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 ORAI1Q96D31 301 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 SMIM19Q96E16 107 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 PGLYRP3Q96LB9 341 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 ALKBH3Q96Q83 286 aaPredicted RBP3.61□□□□□ -1.83
CD44-226ENST00000527889 OR8B4Q96RC9 309 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 TTYH2Q9BSA4 534 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 RBM24Q9BX46 236 aaKnown RBP3.61□□□□□ -1.83
CD44-226ENST00000527889 PRRG4Q9BZD6 226 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 ULBP2Q9BZM5 246 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 SLC22A4Q9H015 551 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 ELOVL3Q9HB03 270 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 ACKR4Q9NPB9 350 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 ZNF71Q9NQZ8 489 aaPredicted RBP3.61□□□□□ -1.83
CD44-226ENST00000527889 POLE4Q9NR33 117 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 TXNL4BQ9NX01 149 aaKnown RBP3.61□□□□□ -1.83
CD44-226ENST00000527889 KCNN3Q9UGI6 736 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 CYB5R1Q9UHQ9 305 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 FBXL3Q9UKT7 428 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 MCTS1Q9ULC4 181 aaKnown RBP3.61□□□□□ -1.83
CD44-226ENST00000527889 TP53TG5Q9Y2B4 290 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 FAM96BQ9Y3D0 163 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 UGT2A1Q9Y4X1 527 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 LRP12Q9Y561 859 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 LHFPL6Q9Y693 200 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 TMEM14AQ9Y6G1 99 aa3.61□□□□□ -1.83
CD44-226ENST00000527889 USP9YO00507 2555 aaPredicted RBP3.6□□□□□ -1.83
CD44-226ENST00000527889 IGKV3D-15A0A087WSY6 115 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 A0A1W2PPK0 400 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 CXorf65A6NEN9 183 aa3.6□□□□□ -1.83
CD44-226ENST00000527889 SLC22A20A6NK97 555 aa3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms