RNA–Protein interactions for RNA: ENST00000527720.5

USH1C-207, Transcript of USH1 protein network component harmonin, humanhuman

TSL 1 (best) BASIC

Gene USH1C, Length 2,278 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-207ENST00000527720 DCUN1D4Q92564 292 aa13.31□□□□□ -0.28
USH1C-207ENST00000527720 C2orf50Q96LR7 162 aa13.31□□□□□ -0.28
USH1C-207ENST00000527720 DMRTA2Q96SC8 542 aa13.31□□□□□ -0.28
USH1C-207ENST00000527720 RNF126Q9BV68 326 aa13.31□□□□□ -0.28
USH1C-207ENST00000527720 TTTY12Q9BZ98 90 aa13.31□□□□□ -0.28
USH1C-207ENST00000527720 ZNF724A8MTY0 619 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 CDX4O14627 284 aaPredicted RBP13.3□□□□□ -0.28
USH1C-207ENST00000527720 PET100P0DJ07 73 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 EDN3P14138 238 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 ITGA3P26006 1051 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 PMELP40967 661 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 PAN3Q58A45 887 aaKnown RBP13.3□□□□□ -0.28
USH1C-207ENST00000527720 PRSS54Q6PEW0 395 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 CCDC120Q96HB5 630 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 CMSS1Q9BQ75 279 aaKnown RBP13.3□□□□□ -0.28
USH1C-207ENST00000527720 ZNF2Q9BSG1 426 aaPredicted RBP13.3□□□□□ -0.28
USH1C-207ENST00000527720 FAAP24Q9BTP7 215 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 SLC7A10Q9NS82 523 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 NECAP2Q9NVZ3 263 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 C1orf123Q9NWV4 160 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 AK3Q9UIJ7 227 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 TNRC6AQ8NDV7 1962 aaKnown RBP13.3□□□□□ -0.28
USH1C-207ENST00000527720 ARHGAP21Q5T5U3 1957 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 IGKV1D-8A0A087WSZ0 117 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 ZNF587BE7ETH6 402 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 F5H0A9 414 aaPredicted RBP13.3□□□□□ -0.28
USH1C-207ENST00000527720 F8VVB4 439 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 F8VWA3 439 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 NAAAQ02083 359 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 SNTB1Q13884 538 aaKnown RBP13.3□□□□□ -0.28
USH1C-207ENST00000527720 BEX5Q5H9J7 111 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 PLCXD3Q63HM9 321 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.3□□□□□ -0.28
USH1C-207ENST00000527720 CPEB3Q8NE35 698 aaKnown RBP13.3□□□□□ -0.28
USH1C-207ENST00000527720 METTL8Q9H825 291 aaKnown RBP13.3□□□□□ -0.28
USH1C-207ENST00000527720 MEMO1Q9Y316 297 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 FREM1Q5H8C1 2179 aa13.3□□□□□ -0.28
USH1C-207ENST00000527720 ADAP1O75689 374 aa13.29□□□□□ -0.28
USH1C-207ENST00000527720 IFNA2P01563 188 aa13.29□□□□□ -0.28
USH1C-207ENST00000527720 FCGR3AP08637 254 aa13.29□□□□□ -0.28
USH1C-207ENST00000527720 ARF1P84077 181 aaKnown RBP13.29□□□□□ -0.28
USH1C-207ENST00000527720 DHRS11Q6UWP2 260 aa13.29□□□□□ -0.28
USH1C-207ENST00000527720 RELL2Q8NC24 303 aaPredicted RBP13.29□□□□□ -0.28
USH1C-207ENST00000527720 PIK3IP1Q96FE7 263 aa13.29□□□□□ -0.28
USH1C-207ENST00000527720 ZNF75AQ96N20 296 aa13.29□□□□□ -0.28
USH1C-207ENST00000527720 LINC00052Q96N35 136 aa13.29□□□□□ -0.28
USH1C-207ENST00000527720 IGKV1-12A0A0C4DH73 117 aa13.29□□□□□ -0.28
USH1C-207ENST00000527720 PLATP00750 562 aa13.29□□□□□ -0.28
USH1C-207ENST00000527720 IGKV1D-12P01611 117 aa13.29□□□□□ -0.28
USH1C-207ENST00000527720 CELA3AP09093 270 aa13.29□□□□□ -0.28
USH1C-207ENST00000527720 OR5H8P0DN80 308 aa13.29□□□□□ -0.28
USH1C-207ENST00000527720 RBMXP38159 391 aaKnown RBP13.29□□□□□ -0.28
USH1C-207ENST00000527720 SRYQ05066 204 aa13.29□□□□□ -0.28
USH1C-207ENST00000527720 SGPP2Q8IWX5 399 aa13.29□□□□□ -0.28
USH1C-207ENST00000527720 OR10AD1Q8NGE0 317 aa13.29□□□□□ -0.28
USH1C-207ENST00000527720 PIGCQ92535 297 aa13.29□□□□□ -0.28
USH1C-207ENST00000527720 SULT4A1Q9BR01 284 aa13.29□□□□□ -0.28
USH1C-207ENST00000527720 HDHD3Q9BSH5 251 aaPredicted RBP13.29□□□□□ -0.28
USH1C-207ENST00000527720 DNAJB11Q9UBS4 358 aa13.29□□□□□ -0.28
USH1C-207ENST00000527720 MSTNO14793 375 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 PTGER4P35408 488 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 MAGEA5P43359 124 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 IL15RAQ13261 267 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 TUSC5Q8IXB3 177 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 POC1AQ8NBT0 407 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 OR51F2Q8NH61 342 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 FER1L6-AS2Q96M78 137 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 C1QTNF6Q9BXI9 259 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 HES7Q9BYE0 225 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 BARX1Q9HBU1 254 aaPredicted RBP13.28□□□□□ -0.28
USH1C-207ENST00000527720 ST3GAL6Q9Y274 331 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 KLF13Q9Y2Y9 288 aaPredicted RBP13.28□□□□□ -0.28
USH1C-207ENST00000527720 FAM90A10PA6NDY2 464 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 FAM90A18PA6NE21 464 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 FAM90A16PA6NEW6 464 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 FAM90A20PA6NIJ5 464 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 CRYM-AS1A6NIL9 109 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 FAM90A8PA6NJQ4 464 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 FAM90A7PA6NKC0 464 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 FAM90A22PA8MWA6 464 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 FAM90A12PA8MX19 464 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 FAM90A5PA8MXJ8 464 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 FAM90A23PA8MXZ1 464 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 H0YIZ8 118 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 GEMIN2O14893 280 aaKnown RBP13.28□□□□□ -0.28
USH1C-207ENST00000527720 KNG1P01042 644 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 IGHV3-9P01782 118 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 FAM90A15PP0C7V4 464 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 FAM90A13PP0C7W8 464 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 FAM90A14PP0C7W9 464 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 FAM90A24PP0C7X0 464 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 TPT1P13693 172 aaKnown RBP13.28□□□□□ -0.28
USH1C-207ENST00000527720 RFC3P40938 356 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 RNPS1Q15287 305 aaKnown RBP13.28□□□□□ -0.28
USH1C-207ENST00000527720 FBXL14Q8N1E6 418 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 TMEM251Q8N6I4 163 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 GALNT11Q8NCW6 608 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 Q8NFD4 153 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 OR10C1Q96KK4 312 aa13.28□□□□□ -0.28
USH1C-207ENST00000527720 AQP10Q96PS8 301 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms