RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 C1QTNF9BB2RNN3 333 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 SOX15O60248 233 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 B4GALT3O60512 393 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 LDB3O75112 727 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 CD74P04233 296 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 PPP1CCP36873 323 aaKnown RBP6.51□□□□□ -1.37
CTNND1-216ENST00000527467 TRA2AQ13595 282 aaKnown RBP eCLIP6.51□□□□□ -1.37
CTNND1-216ENST00000527467 NSUN5P2Q63ZY6 315 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 GLDNQ6ZMI3 551 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-216ENST00000527467 ARRDC1Q8N5I2 433 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 RPEQ96AT9 228 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 ZNF775Q96BV0 537 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-216ENST00000527467 PGPEP1Q9NXJ5 209 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 TECRQ9NZ01 308 aaKnown RBP6.51□□□□□ -1.37
CTNND1-216ENST00000527467 TMED7-TICAM2A0A0A6YYA0 188 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 MGPP08493 103 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 ZNF735P0CB33 412 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 TMIGD3P0DMS9 266 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-216ENST00000527467 EPHA8P29322 1005 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-216ENST00000527467 GPR3P46089 330 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 IER3P46695 156 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 IL10RAQ13651 578 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 FAAP20Q6NZ36 180 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 ETFBKMTQ8IXQ9 262 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 FAM216AQ8WUB2 273 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 TSACCQ96A04 125 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-216ENST00000527467 NIPSNAP1Q9BPW8 284 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 DERL1Q9BUN8 251 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 ACPTQ9BZG2 426 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 THAP10Q9P2Z0 257 aaPredicted RBP6.51□□□□□ -1.37
CTNND1-216ENST00000527467 ICAM5Q9UMF0 924 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 TMED7Q9Y3B3 224 aa6.51□□□□□ -1.37
CTNND1-216ENST00000527467 MYH13Q9UKX3 1938 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 IGLON5A6NGN9 336 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 DNASE2O00115 360 aaPredicted RBP6.5□□□□□ -1.37
CTNND1-216ENST00000527467 ONECUT2O95948 504 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 SMIM13P0DJ93 91 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 HLA-GP17693 338 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 LGALS3P17931 250 aaKnown RBP6.5□□□□□ -1.37
CTNND1-216ENST00000527467 CTSSP25774 331 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 EIF1P41567 113 aaKnown RBP6.5□□□□□ -1.37
CTNND1-216ENST00000527467 SPINT3P49223 89 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 PPP1CAP62136 330 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 CLN3Q13286 438 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 CTF1Q16619 201 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 PNLIPRP3Q17RR3 467 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 TMEM249Q2WGJ8 235 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 PDPNQ86YL7 162 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 CBLN2Q8IUK8 224 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 WDR31Q8NA23 367 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 TMEM229BQ8NBD8 167 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 OR52N4Q8NGI2 321 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 PIK3IP1Q96FE7 263 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 CALHM2Q9HA72 323 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 TRAV8-7A0A075B6U6 113 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 EPXP11678 715 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 TBXA2RP21731 343 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 OPRK1P41145 380 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 UBE2L3P68036 154 aaKnown RBP6.5□□□□□ -1.37
CTNND1-216ENST00000527467 SELENBP1Q13228 472 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 TAZQ16635 292 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 GGTA1PQ4G0N0 100 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 KHDC3LQ587J8 217 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 SAPCD1Q5SSQ6 148 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 NIT1Q86X76 327 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 ZDHHC22Q8N966 263 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 OR5C1Q8NGR4 320 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 UBTD2Q8WUN7 234 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 TIMP4Q99727 224 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 DDA1Q9BW61 102 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 SH2D2AQ9NP31 389 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 CLDN16Q9Y5I7 305 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 A0A0B4J293 547 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 METTL12A8MUP2 240 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 TNFSF15O95150 251 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 MT-ATP6P00846 226 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 TYMSP04818 313 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 FOXA1P55317 472 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 FAM3BP58499 235 aaPredicted RBP6.5□□□□□ -1.37
CTNND1-216ENST00000527467 PLPPR5Q32ZL2 321 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 ZNF687Q8N1G0 1237 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 BHLHE23Q8NDY6 225 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 OR52B4Q8NGK2 314 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.5□□□□□ -1.37
CTNND1-216ENST00000527467 PTX4Q96A99 478 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 PERPQ96FX8 193 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 HSD17B10Q99714 261 aaKnown RBP6.5□□□□□ -1.37
CTNND1-216ENST00000527467 HSPB9Q9BQS6 159 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 SLC25A22Q9H936 323 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 MRPS2Q9Y399 296 aaKnown RBP6.5□□□□□ -1.37
CTNND1-216ENST00000527467 SLC25A17O43808 307 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 IGHA1P01876 353 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 IGHA2P01877 340 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 SOD3P08294 240 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 WBP2Q969T9 261 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 PRELID3AQ96N28 172 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 LINC00052Q96N35 136 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 PIMREGQ9BSJ6 248 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 CHST6Q9GZX3 395 aa6.5□□□□□ -1.37
CTNND1-216ENST00000527467 BEX4Q9NWD9 120 aaPredicted RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms