RNA–Protein interactions for RNA: ENST00000525284.5

LRRK1-202, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 6,494 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-202ENST00000525284 PRSS50Q9UI38 385 aa12.28□□□□□ -0.44
LRRK1-202ENST00000525284 VSIG4Q9Y279 399 aa12.28□□□□□ -0.44
LRRK1-202ENST00000525284 B4DEV8 164 aa12.27□□□□□ -0.44
LRRK1-202ENST00000525284 ATF1P18846 271 aa12.27□□□□□ -0.44
LRRK1-202ENST00000525284 COX7A1P24310 79 aa12.27□□□□□ -0.44
LRRK1-202ENST00000525284 OR3A4PP47883 348 aa12.27□□□□□ -0.44
LRRK1-202ENST00000525284 FUT6P51993 359 aa12.27□□□□□ -0.44
LRRK1-202ENST00000525284 ERVFRD-1P60508 538 aa12.27□□□□□ -0.44
LRRK1-202ENST00000525284 PTRH1Q86Y79 214 aaKnown RBP12.27□□□□□ -0.44
LRRK1-202ENST00000525284 NUDT8Q8WV74 236 aa12.27□□□□□ -0.44
LRRK1-202ENST00000525284 BEX4Q9NWD9 120 aaPredicted RBP12.27□□□□□ -0.44
LRRK1-202ENST00000525284 C11orf94C9JXX5 98 aa12.27□□□□□ -0.44
LRRK1-202ENST00000525284 SYNGR2O43760 224 aa12.27□□□□□ -0.44
LRRK1-202ENST00000525284 CXCL13O43927 109 aa12.27□□□□□ -0.44
LRRK1-202ENST00000525284 MT-CO3P00414 261 aa12.27□□□□□ -0.44
LRRK1-202ENST00000525284 IGHV3-13P01766 116 aa12.27□□□□□ -0.44
LRRK1-202ENST00000525284 IGHV3-7P01780 117 aa12.27□□□□□ -0.44
LRRK1-202ENST00000525284 SMIM6P0DI80 62 aa12.27□□□□□ -0.44
LRRK1-202ENST00000525284 GABRA1P14867 456 aa12.27□□□□□ -0.44
LRRK1-202ENST00000525284 CDAP32320 146 aa12.27□□□□□ -0.44
LRRK1-202ENST00000525284 WFDC3Q8IUB2 231 aa12.27□□□□□ -0.44
LRRK1-202ENST00000525284 ZC3H3Q8IXZ2 948 aaKnown RBP12.27□□□□□ -0.44
LRRK1-202ENST00000525284 MBNL1Q9NR56 388 aaKnown RBP12.27□□□□□ -0.44
LRRK1-202ENST00000525284 ACP1P24666 158 aa12.27□□□□□ -0.45
LRRK1-202ENST00000525284 CLDN15P56746 228 aa12.27□□□□□ -0.45
LRRK1-202ENST00000525284 CACNG7P62955 275 aa12.27□□□□□ -0.45
LRRK1-202ENST00000525284 KCNAB1Q14722 419 aa12.27□□□□□ -0.45
LRRK1-202ENST00000525284 ELFN2Q5R3F8 820 aa12.27□□□□□ -0.45
LRRK1-202ENST00000525284 RHBDD2Q6NTF9 364 aa12.27□□□□□ -0.45
LRRK1-202ENST00000525284 MTURNQ8N3F0 131 aa12.27□□□□□ -0.45
LRRK1-202ENST00000525284 FAM169BQ8N8A8 192 aa12.27□□□□□ -0.45
LRRK1-202ENST00000525284 TEX37Q96LM6 180 aa12.27□□□□□ -0.45
LRRK1-202ENST00000525284 S1PR5Q9H228 398 aa12.27□□□□□ -0.45
LRRK1-202ENST00000525284 RGPD1P0DJD0 1748 aa12.27□□□□□ -0.45
LRRK1-202ENST00000525284 BSGP35613 385 aa12.27□□□□□ -0.45
LRRK1-202ENST00000525284 PSG5Q15238 335 aa12.27□□□□□ -0.45
LRRK1-202ENST00000525284 KTI12Q96EK9 354 aaPredicted RBP12.27□□□□□ -0.45
LRRK1-202ENST00000525284 LINC00052Q96N35 136 aa12.27□□□□□ -0.45
LRRK1-202ENST00000525284 FZR1Q9UM11 496 aa12.27□□□□□ -0.45
LRRK1-202ENST00000525284 SLC45A1Q9Y2W3 748 aa12.27□□□□□ -0.45
LRRK1-202ENST00000525284 C3orf85A0A1B0GTC6 90 aa12.27□□□□□ -0.45
LRRK1-202ENST00000525284 MRPL58Q14197 206 aaKnown RBP12.27□□□□□ -0.45
LRRK1-202ENST00000525284 IZUMO4Q1ZYL8 232 aa12.27□□□□□ -0.45
LRRK1-202ENST00000525284 FAHD2BQ6P2I3 314 aaPredicted RBP12.27□□□□□ -0.45
LRRK1-202ENST00000525284 UBE2L6O14933 153 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 OXGR1Q96P68 337 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 HIST1H4GQ99525 98 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 CDCA4Q9BXL8 241 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 TMED3Q9Y3Q3 217 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 MYH7P12883 1935 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 ICOSLGO75144 302 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 PGA3P0DJD8 388 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 EPXP11678 715 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 COA4Q9NYJ1 87 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 GSTZ1O43708 216 aaPredicted RBP12.26□□□□□ -0.45
LRRK1-202ENST00000525284 PRKNO60260 465 aaPredicted RBP12.26□□□□□ -0.45
LRRK1-202ENST00000525284 FKBP2P26885 142 aaKnown RBP12.26□□□□□ -0.45
LRRK1-202ENST00000525284 PPP1CCP36873 323 aaKnown RBP12.26□□□□□ -0.45
LRRK1-202ENST00000525284 MMP15P51511 669 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 DYNLT3P51808 116 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 FAM27D1Q5T7N8 215 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 FGF13Q92913 245 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 MYH13Q9UKX3 1938 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 TLCD2A6NGC4 264 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 M0R296 226 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 PTGESO14684 152 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 DHRS3O75911 302 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 PPP1CAP62136 330 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 TNXAQ16473 311 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 OR4P4Q8NGL7 312 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 SFRP2Q96HF1 295 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 OR2W5A6NFC9 320 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 HMGN4O00479 90 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 SLC17A2O00624 439 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 TSPAN12O95859 305 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 NGFP01138 241 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 CD74P04233 296 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 STAG3L3P0CL85 134 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 NAT2P11245 290 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 HTR3DQ70Z44 454 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 SMIM4Q8WVI0 70 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 SDF2Q99470 211 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 UBE2ZQ9H832 354 aaPredicted RBP12.26□□□□□ -0.45
LRRK1-202ENST00000525284 MANBALQ9NQG1 85 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 SLIT2O94813 1529 aa12.26□□□□□ -0.45
LRRK1-202ENST00000525284 A0A1W2PRD5 423 aa12.25□□□□□ -0.45
LRRK1-202ENST00000525284 A0A1W2PRF3 423 aa12.25□□□□□ -0.45
LRRK1-202ENST00000525284 A0A1W2PRM7 423 aa12.25□□□□□ -0.45
LRRK1-202ENST00000525284 TAPBPO15533 448 aa12.25□□□□□ -0.45
LRRK1-202ENST00000525284 PRSS2P07478 247 aa12.25□□□□□ -0.45
LRRK1-202ENST00000525284 CSNK1DP48730 415 aa12.25□□□□□ -0.45
LRRK1-202ENST00000525284 YPEL5P62699 121 aa12.25□□□□□ -0.45
LRRK1-202ENST00000525284 SPPL3Q8TCT6 385 aa12.25□□□□□ -0.45
LRRK1-202ENST00000525284 TRAF4Q9BUZ4 470 aaPredicted RBP12.25□□□□□ -0.45
LRRK1-202ENST00000525284 GDE1Q9NZC3 331 aa12.25□□□□□ -0.45
LRRK1-202ENST00000525284 MOB4Q9Y3A3 225 aa12.25□□□□□ -0.45
LRRK1-202ENST00000525284 LRRC37A3O60309 1634 aa12.25□□□□□ -0.45
LRRK1-202ENST00000525284 ST3GAL2Q16842 350 aa12.25□□□□□ -0.45
LRRK1-202ENST00000525284 NUP188Q5SRE5 1749 aa12.25□□□□□ -0.45
LRRK1-202ENST00000525284 C1orf220Q5T0J3 134 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms