RNA–Protein interactions for RNA: ENST00000525241.1

CD44-215, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 440 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-215ENST00000525241 OR4K2Q8NGD2 314 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 TCP10LQ8TDR4 215 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 TNFRSF14Q92956 283 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 PEX13Q92968 403 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 ZNF707Q96C28 371 aaPredicted RBP1.73□□□□□ -2.13
CD44-215ENST00000525241 FXYD5Q96DB9 178 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 THTPAQ9BU02 230 aa1.73□□□□□ -2.13
CD44-215ENST00000525241 KLF13Q9Y2Y9 288 aaPredicted RBP1.73□□□□□ -2.13
CD44-215ENST00000525241 MROH5Q6ZUA9 1318 aa1.72□□□□□ -2.13
CD44-215ENST00000525241 CACNA1AO00555 2505 aa1.72□□□□□ -2.13
CD44-215ENST00000525241 NCF1BA6NI72 391 aaPredicted RBP1.72□□□□□ -2.13
CD44-215ENST00000525241 NCF1CA8MVU1 366 aaPredicted RBP1.72□□□□□ -2.13
CD44-215ENST00000525241 HMMRO75330 724 aa1.72□□□□□ -2.13
CD44-215ENST00000525241 SNRPAP09012 282 aaKnown RBP1.72□□□□□ -2.13
CD44-215ENST00000525241 FUSP35637 526 aaKnown RBP eCLIP1.72□□□□□ -2.13
CD44-215ENST00000525241 CSKP41240 450 aa1.72□□□□□ -2.13
CD44-215ENST00000525241 NUDT2P50583 147 aa1.72□□□□□ -2.13
CD44-215ENST00000525241 MLF1P58340 268 aa1.72□□□□□ -2.13
CD44-215ENST00000525241 PMVKQ15126 192 aa1.72□□□□□ -2.13
CD44-215ENST00000525241 ELOCQ15369 112 aa1.72□□□□□ -2.13
CD44-215ENST00000525241 KRTAP21-2Q3LI59 83 aa1.72□□□□□ -2.13
CD44-215ENST00000525241 CLEC18BQ6UXF7 455 aa1.72□□□□□ -2.13
CD44-215ENST00000525241 FAM231DQ6ZW35 169 aa1.72□□□□□ -2.13
CD44-215ENST00000525241 OR5H2Q8NGV7 314 aa1.72□□□□□ -2.13
CD44-215ENST00000525241 ZFAND1Q8TCF1 268 aa1.72□□□□□ -2.13
CD44-215ENST00000525241 AGR3Q8TD06 166 aa1.72□□□□□ -2.13
CD44-215ENST00000525241 TFGQ92734 400 aaPredicted RBP1.72□□□□□ -2.13
CD44-215ENST00000525241 PPP1R36Q96LQ0 422 aa1.72□□□□□ -2.13
CD44-215ENST00000525241 MRPL20Q9BYC9 149 aaKnown RBP1.72□□□□□ -2.13
CD44-215ENST00000525241 BLZF1Q9H2G9 400 aa1.72□□□□□ -2.13
CD44-215ENST00000525241 NLE1Q9NVX2 485 aaPredicted RBP1.72□□□□□ -2.13
CD44-215ENST00000525241 PEF1Q9UBV8 284 aaKnown RBP1.72□□□□□ -2.13
CD44-215ENST00000525241 PRO0628Q9UI54 55 aa1.72□□□□□ -2.13
CD44-215ENST00000525241 TFR2Q9UP52 801 aa1.72□□□□□ -2.13
CD44-215ENST00000525241 ORC6Q9Y5N6 252 aa1.72□□□□□ -2.13
CD44-215ENST00000525241 TTC41PQ6P2S7 1318 aa1.71□□□□□ -2.14
CD44-215ENST00000525241 PRR14LQ5THK1 2151 aa1.71□□□□□ -2.14
CD44-215ENST00000525241 A0A1W2PRF3 423 aa1.71□□□□□ -2.14
CD44-215ENST00000525241 A0A1W2PRM7 423 aa1.71□□□□□ -2.14
CD44-215ENST00000525241 C9JQL5 133 aa1.71□□□□□ -2.14
CD44-215ENST00000525241 TRAPPC6AO75865 159 aa1.71□□□□□ -2.14
CD44-215ENST00000525241 PRPS1L1P21108 318 aa1.71□□□□□ -2.14
CD44-215ENST00000525241 RPL10AP62906 217 aaKnown RBP1.71□□□□□ -2.14
CD44-215ENST00000525241 ENDOGQ14249 297 aaKnown RBP1.71□□□□□ -2.14
CD44-215ENST00000525241 CDNFQ49AH0 187 aa1.71□□□□□ -2.14
CD44-215ENST00000525241 THOC7Q6I9Y2 204 aaKnown RBP1.71□□□□□ -2.14
CD44-215ENST00000525241 PHOSPHO2Q8TCD6 241 aa1.71□□□□□ -2.14
CD44-215ENST00000525241 ZNF75AQ96N20 296 aa1.71□□□□□ -2.14
CD44-215ENST00000525241 STACQ99469 402 aa1.71□□□□□ -2.14
CD44-215ENST00000525241 C20orf144Q9BQM9 153 aa1.71□□□□□ -2.14
CD44-215ENST00000525241 TMED9Q9BVK6 235 aa1.71□□□□□ -2.14
CD44-215ENST00000525241 PARP11Q9NR21 331 aa1.71□□□□□ -2.14
CD44-215ENST00000525241 ICOSQ9Y6W8 199 aa1.71□□□□□ -2.14
CD44-215ENST00000525241 SPATA31E1Q6ZUB1 1445 aa1.71□□□□□ -2.14
CD44-215ENST00000525241 NEURL4Q96JN8 1562 aa1.71□□□□□ -2.14
CD44-215ENST00000525241 PKD1L2Q7Z442 2459 aa1.71□□□□□ -2.14
CD44-215ENST00000525241 C2orf16Q68DN1 1984 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 GMNCA6NCL1 334 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 SDHAF1A6NFY7 115 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 CENPXA8MT69 81 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 H0YIV9 168 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 CASC3O15234 703 aaKnown RBP1.7□□□□□ -2.14
CD44-215ENST00000525241 TPM2P07951 284 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 RALBP11234 206 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 IVDP26440 423 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 SLC35B1P78383 322 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 CLEC19AQ6UXS0 136 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 COMTD1Q86VU5 262 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 CYP4Z2PQ8N1L4 340 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 RPRMLQ8N4K4 120 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 EIF4E3Q8N5X7 224 aaKnown RBP1.7□□□□□ -2.14
CD44-215ENST00000525241 OR6K6Q8NGW6 343 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 SMIM8Q96KF7 97 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 TSNAXQ99598 290 aaKnown RBP1.7□□□□□ -2.14
CD44-215ENST00000525241 IL22Q9GZX6 179 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 CHRNA10Q9GZZ6 450 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 KIR3DX1Q9H7L2 352 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 CYP3A43Q9HB55 503 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 C6orf50Q9HD87 102 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 MYO16Q9Y6X6 1858 aa1.7□□□□□ -2.14
CD44-215ENST00000525241 PLXNB1O43157 2135 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 FAM240AA0A1B0GVK7 77 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 GGTLC3B5MD39 225 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 ISLRO14498 428 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 SYNGR2O43760 224 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 DHRS3O75911 302 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 OR2A4O95047 310 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 IGHV3-53P01767 116 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 TRGV3P03979 118 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 CDK1P06493 297 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 OR5AL1P0C617 328 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 PTHLHP12272 177 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 PSMD8P48556 350 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 IL5RAQ01344 420 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 CLLU1OSQ5K130 101 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 FAM27D1Q5T7N8 215 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 SETD3Q86TU7 594 aaPredicted RBP1.69□□□□□ -2.14
CD44-215ENST00000525241 OR8S1Q8NH09 359 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 OR51A7Q8NH64 312 aa1.69□□□□□ -2.14
CD44-215ENST00000525241 OR2A7Q96R45 310 aa1.69□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms