RNA–Protein interactions for RNA: ENST00000523298.5

CTNNA1-238, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-238ENST00000523298 FARSAQ9Y285 508 aaKnown RBP3.26□□□□□ -1.89
CTNNA1-238ENST00000523298 SLC17A4Q9Y2C5 497 aa3.26□□□□□ -1.89
CTNNA1-238ENST00000523298 ALG5Q9Y673 324 aa3.26□□□□□ -1.89
CTNNA1-238ENST00000523298 CDK12Q9NYV4 1490 aaPredicted RBP3.26□□□□□ -1.89
CTNNA1-238ENST00000523298 NHSQ6T4R5 1651 aa3.26□□□□□ -1.89
CTNNA1-238ENST00000523298 BLMP54132 1417 aaPredicted RBP3.26□□□□□ -1.89
CTNNA1-238ENST00000523298 SPEF2Q9C093 1822 aa3.26□□□□□ -1.89
CTNNA1-238ENST00000523298 RTL1A6NKG5 1358 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 LY75O60449 1722 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 CACNA1SQ13698 1873 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 NSG1A0A0A6YYJ2 146 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 SMIM9A6NGZ8 99 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 H3BMQ9 156 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 FCN1O00602 326 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 MSH4O15457 936 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 TAPBPO15533 448 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 EIF4E2O60573 245 aaKnown RBP3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 RP2O75695 350 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 ISG15P05161 165 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 RHOCP08134 193 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 HTR1AP08908 422 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 BCKDHAP12694 445 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 OGNP20774 298 aaKnown RBP3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 GABRR1P24046 479 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 PHBP35232 272 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 RPL13AP40429 203 aaKnown RBP3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 TNFSF9P41273 254 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 NSG1P42857 185 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 YAP1P46937 504 aaKnown RBP3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 TTPAP49638 278 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 CRISP1P54107 249 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 OR10A3P58181 314 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 RAP1BP61224 184 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 RHOAP61586 193 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 RPL32P62910 135 aaKnown RBP3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 IL5RAQ01344 420 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 CD47Q08722 323 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 BAMBIQ13145 260 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 LAGE3Q14657 143 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 ATP6AP1Q15904 470 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 ATP6V1FQ16864 119 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 ACTL10Q5JWF8 245 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 KCTD16Q68DU8 428 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 ASCL5Q7RTU5 278 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 FAM220AQ7Z4H9 259 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 ANGPTL5Q86XS5 388 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 MTURNQ8N3F0 131 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 METTL13Q8N6R0 699 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 ZSCAN4Q8NAM6 433 aaPredicted RBP3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 ATP6V1C2Q8NEY4 427 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 OR10G3Q8NGC4 313 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 OR5L2Q8NGL0 311 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 COQ8AQ8NI60 647 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 SYNPRQ8TBG9 265 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 SDR42E1Q8WUS8 393 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 C11orf40Q8WZ69 217 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 OR5P2Q8WZ92 322 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 C12orf43Q96C57 262 aaKnown RBP3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 DCPSQ96C86 337 aaKnown RBP3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 HAUS1Q96CS2 278 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 L3HYPDHQ96EM0 354 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 ITCHQ96J02 903 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 PLEKHF1Q96S99 279 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 CNN2Q99439 309 aaKnown RBP3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 SLC6A7Q99884 636 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 CDCA4Q9BXL8 241 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 ACTR3CQ9C0K3 210 aaPredicted RBP3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 UBE2ZQ9H832 354 aaPredicted RBP3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 ZNF702PQ9H963 129 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 WFDC1Q9HC57 220 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 CLN6Q9NWW5 311 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 VPREB3Q9UKI3 123 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 KIF25-AS1Q9Y6Z4 181 aa3.25□□□□□ -1.89
CTNNA1-238ENST00000523298 A0A0A6YYD5 115 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 LOC100131303A0A0U1RQF7 123 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 LOC110117498-PIK3R3F6TDL0 507 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 M0QYV0 167 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 BHLHE40O14503 412 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 MPZL2O60487 215 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 EIF3GO75821 320 aaKnown RBP eCLIP3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 DIRAS1O95057 198 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 TTC4O95801 387 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 OXTP01178 125 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 IFNA4P05014 189 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 BCHEP06276 602 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 CST2P09228 141 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 HIST1H1EP10412 219 aaKnown RBP3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 ZNF17P17021 662 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 ZNF19P17023 458 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 PGCP20142 388 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 ATP6V1B2P21281 511 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 HMGB2P26583 209 aaKnown RBP3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 HTR1FP30939 366 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 CA5AP35218 305 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 RCVRNP35243 200 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 RAB7AP51149 207 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 NTHL1P78549 312 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 SPA17Q15506 151 aa3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 TRIP13Q15645 432 aaPredicted RBP3.24□□□□□ -1.89
CTNNA1-238ENST00000523298 PRR4Q16378 134 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms