RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 SIAEQ9HAT2 523 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 CCNB1IP1Q9NPC3 277 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 HEYLQ9NQ87 328 aaPredicted RBP5.34□□□□□ -1.55
SDCBP-210ENST00000522843 INPP5EQ9NRR6 644 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 SCN3BQ9NY72 215 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 TAS2R5Q9NYW4 299 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 CNOT2Q9NZN8 540 aaKnown RBP5.34□□□□□ -1.55
SDCBP-210ENST00000522843 PSORS1C1Q9UIG5 152 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 ZNF229Q9UJW7 825 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 FAM96BQ9Y3D0 163 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 MAB21L2Q9Y586 359 aa5.34□□□□□ -1.55
SDCBP-210ENST00000522843 A0A1B0GW55 424 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 BTBD17A6NE02 478 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 NPIPB13A6NJU9 1138 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 SNTNA6NMZ2 147 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 NPIPB4C9JG80 1138 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 F5H5P2 479 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 SLC1A7O00341 560 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 NPFFO15130 113 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 SURF4O15260 269 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 OR7A10O76100 309 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 DUX4L2P0CJ85 424 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 DUX4L3P0CJ86 424 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 DUX4L4P0CJ87 422 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 DUX4L5P0CJ88 424 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 DUX4L6P0CJ89 424 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 DUX4L7P0CJ90 424 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 ADORA3P0DMS8 318 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 ERVK-25P63136 954 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 IL5RAQ01344 420 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 IRF3Q14653 427 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 ZNF74Q16587 644 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 KLHL22Q53GT1 634 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 TCTEX1D4Q5JR98 221 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 C10orf128Q5T292 105 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 AADACL4Q5VUY2 407 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 DUX4L9Q6RFH8 374 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-210ENST00000522843 METAP1DQ6UB28 335 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-210ENST00000522843 ADAMTSL5Q6ZMM2 481 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 PTCHD4Q6ZW05 846 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 BTN2A1Q7KYR7 527 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 PRSS48Q7RTY5 328 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 SPARTQ8N0X7 666 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 OR5AS1Q8N127 324 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 Q8N2B8 174 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 Q8N7P7 452 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 SPERTQ8NA61 448 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 OR2T33Q8NG76 320 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 OR8D4Q8NGM9 314 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 OR5J2Q8NH18 312 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 TEX47Q8TBZ9 253 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 TMEM163Q8TC26 289 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 PIFOQ8TCI5 191 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 RORBQ92753 470 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 GGHQ92820 318 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 RBMXL1Q96E39 390 aaKnown RBP5.33□□□□□ -1.56
SDCBP-210ENST00000522843 TSSK6Q9BXA6 273 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 CDCA4Q9BXL8 241 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 PRRG3Q9BZD7 231 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 FAM192AQ9GZU8 254 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 OR52D1Q9H346 318 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 RANBP3Q9H6Z4 567 aaPredicted RBP5.33□□□□□ -1.56
SDCBP-210ENST00000522843 NRIP3Q9NQ35 241 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 SIRT7Q9NRC8 400 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 CLN6Q9NWW5 311 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 HAO2Q9NYQ3 351 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 DUX4Q9UBX2 424 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 STARD10Q9Y365 291 aa5.33□□□□□ -1.56
SDCBP-210ENST00000522843 RPL36Q9Y3U8 105 aaKnown RBP5.33□□□□□ -1.56
SDCBP-210ENST00000522843 LSM4Q9Y4Z0 139 aaKnown RBP5.33□□□□□ -1.56
SDCBP-210ENST00000522843 SMIM31A0A1B0GVY4 71 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 IRGMA1A4Y4 181 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 DPPA5A6NC42 116 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 EFCAB10A6NFE3 127 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 H3BN98 237 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 J3QRE1 110 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 ZNF701M0R085 212 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-210ENST00000522843 TRIAP1O43715 76 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 AHCYL1O43865 530 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 PRKYO43930 277 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 NDUFB2O95178 105 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 HTR1AP08908 422 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 SLC6A6P31641 620 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 SAA4P35542 130 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 GPR4P46093 362 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 NPY4RP50391 375 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 MRPS34P82930 218 aaKnown RBP5.32□□□□□ -1.56
SDCBP-210ENST00000522843 FMODQ06828 376 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 MAB21L1Q13394 359 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 SNAPC1Q16533 368 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 CDONQ4KMG0 1287 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 ARMC4Q5T2S8 1044 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 SYT6Q5T7P8 510 aaPredicted RBP5.32□□□□□ -1.56
SDCBP-210ENST00000522843 NXNL2Q5VZ03 156 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 TMEM236Q5W0B7 351 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 ZFAND6Q6FIF0 208 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 XAF1Q6GPH4 301 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 OAFQ86UD1 273 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 IGFN1Q86VF2 1251 aa5.32□□□□□ -1.56
SDCBP-210ENST00000522843 PNLDC1Q8NA58 520 aaKnown RBP5.32□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms