RNA–Protein interactions for RNA: ENST00000522122.1

SYNPO-205, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNPO, Length 5,098 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-205ENST00000522122 NECAP1Q8NC96 275 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 SLC25A38Q96DW6 304 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 MTCH2Q9Y6C9 303 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 PTPRDP23468 1912 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 LOC105371267A0A1B0GV96 52 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 A0A1W2PQD3 144 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 IGF2P01344 180 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 THY1P04216 161 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 IFI6P09912 130 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 DTYMKP23919 212 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 ZNF718Q3SXZ3 478 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 JMJD6Q6NYC1 403 aaPredicted RBP12.26□□□□□ -0.45
SYNPO-205ENST00000522122 SKA3Q8IX90 412 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 SCCPDHQ8NBX0 429 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 EDARADDQ8WWZ3 215 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 NTNG2Q96CW9 530 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 TM4SF19Q96DZ7 209 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 ZNF75AQ96N20 296 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 TRAV8-7A0A075B6U6 113 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 A0A0G2JK05 382 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 ZNF32P17041 273 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 FZD5Q13467 585 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 ZNF345Q14585 488 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 UNQ9370/PRO34162Q6UXP9 181 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 TMPRSS7Q7RTY8 843 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 ZPLD1Q8TCW7 415 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 MITD1Q8WV92 249 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 EGLN1Q9GZT9 426 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 NMBP08949 121 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 FABP6P51161 128 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 SUB1P53999 127 aaKnown RBP eCLIP12.26□□□□□ -0.45
SYNPO-205ENST00000522122 DVL1P1P54792 670 aaPredicted RBP12.26□□□□□ -0.45
SYNPO-205ENST00000522122 GAS1P54826 345 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 GNG3P63215 75 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 SEZ6L2Q6UXD5 910 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 DEFB108BQ8NET1 73 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 OR10AC1Q8NH08 325 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 CMTM2Q8TAZ6 248 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 SLC35E1Q96K37 410 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 LRRC3BQ96PB8 259 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 OR51I2Q9H344 312 aa12.26□□□□□ -0.45
SYNPO-205ENST00000522122 ZNF331Q9NQX6 463 aaPredicted RBP12.26□□□□□ -0.45
SYNPO-205ENST00000522122 IGHV1OR15-9A0A0B4J2B8 117 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 PMP22Q01453 160 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 SRSF5Q13243 272 aaKnown RBP12.25□□□□□ -0.45
SYNPO-205ENST00000522122 C4orf17Q53FE4 359 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 GGNBP1Q5YKI7 109 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 NCR3LG1Q68D85 454 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 OR13D1Q8NGV5 346 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 OR8U1Q8NH10 309 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 ERGIC1Q969X5 290 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 BSCL2Q96G97 398 aaPredicted RBP12.25□□□□□ -0.45
SYNPO-205ENST00000522122 ALX4Q9H161 411 aaPredicted RBP12.25□□□□□ -0.45
SYNPO-205ENST00000522122 RASL12Q9NYN1 266 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 TRBV5-5A0A0J9YX44 114 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 MASP2O00187 686 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 ADAP1O75689 374 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 ZIC2O95409 532 aaPredicted RBP12.25□□□□□ -0.45
SYNPO-205ENST00000522122 ZNF90Q03938 601 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 IL11RAQ14626 422 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 NHLRC3Q5JS37 347 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 GALMQ96C23 342 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 UNC13CQ8NB66 2214 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 SLC22A20A6NK97 555 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 MBTPS2O43462 519 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 CFDP00746 253 aaPredicted RBP12.25□□□□□ -0.45
SYNPO-205ENST00000522122 TMIGD3P0DMS9 266 aaPredicted RBP12.25□□□□□ -0.45
SYNPO-205ENST00000522122 KIR2DL1P43626 348 aaPredicted RBP12.25□□□□□ -0.45
SYNPO-205ENST00000522122 LIMK1P53667 647 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 EFNB1P98172 346 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 RGS7BPQ6MZT1 257 aaPredicted RBP12.25□□□□□ -0.45
SYNPO-205ENST00000522122 RHBDD2Q6NTF9 364 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 ZNF774Q6NX45 483 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 OR6X1Q8NH79 312 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 NUBPLQ8TB37 319 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 PINX1Q96BK5 328 aaKnown RBP12.25□□□□□ -0.45
SYNPO-205ENST00000522122 TRIB1Q96RU8 372 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 S1PR3Q99500 378 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 YBX2Q9Y2T7 364 aaKnown RBP12.25□□□□□ -0.45
SYNPO-205ENST00000522122 AHCTF1Q8WYP5 2266 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 PDCD6O75340 191 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 GALNSP34059 522 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 BTCP35070 178 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 FHL5Q5TD97 284 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 ZPBPQ9BS86 351 aa12.25□□□□□ -0.45
SYNPO-205ENST00000522122 SPTBP11277 2137 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 OR5H15A6NDH6 313 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 ZNF891A8MT65 544 aaPredicted RBP12.24□□□□□ -0.45
SYNPO-205ENST00000522122 TBX6O95947 436 aaPredicted RBP12.24□□□□□ -0.45
SYNPO-205ENST00000522122 SLC25A4P12235 298 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 NXPH1P58417 271 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 RAC1P63000 192 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 TIGITQ495A1 244 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 BTNL8Q6UX41 500 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 ASB10Q8WXI3 467 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 MS4A7Q9GZW8 240 aaPredicted RBP12.24□□□□□ -0.45
SYNPO-205ENST00000522122 RYDENQ9NUL5 291 aaKnown RBP12.24□□□□□ -0.45
SYNPO-205ENST00000522122 GSK3AP49840 483 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 SKP2Q13309 424 aa12.24□□□□□ -0.45
SYNPO-205ENST00000522122 INPP5JQ15735 1006 aaPredicted RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms