RNA–Protein interactions for RNA: ENST00000520286.5

LSM1-202, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

TSL 1 (best)

Gene LSM1, Length 776 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-202ENST00000520286 GPX8Q8TED1 209 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 TMBIM1Q969X1 311 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 ZHX1-C8orf76Q96EF9 292 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 GPR22Q99680 433 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 GABARAPL1Q9H0R8 117 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 OR51B5Q9H339 312 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 ACOT13Q9NPJ3 140 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 SLC17A4Q9Y2C5 497 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 HES2Q9Y543 173 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 PTPRJQ12913 1337 aa5.22□□□□□ -1.57
LSM1-202ENST00000520286 SPTBN4Q9H254 2564 aa5.21□□□□□ -1.57
LSM1-202ENST00000520286 A0A0G2JN53 185 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 A0A1B0GVI7 797 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 HACD1B0YJ81 288 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 PRMT5O14744 637 aaPredicted RBP5.21□□□□□ -1.58
LSM1-202ENST00000520286 SLC16A4O15374 487 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 EMC8O43402 210 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 TPST1O60507 370 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 NPIPB7O75200 414 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 SLC22A5O76082 557 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 KLF8O95600 359 aaPredicted RBP5.21□□□□□ -1.58
LSM1-202ENST00000520286 IGKV3-15P01624 115 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 FOLR1P15328 257 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 ZNF250P15622 560 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 FUT3P21217 361 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 CD9P21926 228 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 HIKESHIQ53FT3 197 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 ZNF470Q6ECI4 717 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 FBXL22Q6P050 247 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 ZNF555Q8NEP9 628 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 OR4F15Q8NGB8 312 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 OR52E4Q8NGH9 312 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 OR2G3Q8NGZ4 309 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 DEDD2Q8WXF8 326 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 CIDECQ96AQ7 238 aaPredicted RBP5.21□□□□□ -1.58
LSM1-202ENST00000520286 TESCQ96BS2 214 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 LRRC58Q96CX6 371 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 PIK3IP1Q96FE7 263 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 SLC39A1Q9NY26 324 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 CCDC167Q9P0B6 97 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 IL17CQ9P0M4 197 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 TPRKBQ9Y3C4 175 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 ANK1P16157 1881 aa5.21□□□□□ -1.58
LSM1-202ENST00000520286 TSC2P49815 1807 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 PARP14Q460N5 1801 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 KMT2BQ9UMN6 2715 aaPredicted RBP5.2□□□□□ -1.58
LSM1-202ENST00000520286 CACNA1GO43497 2377 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 CACNA1HO95180 2353 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 KCNE1BA0A087WTH5 132 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 A0A0B4J2A0 478 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 ZNF816-ZNF321PA0A0X1KG74 233 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 LOC100130705A0A1B0GUX0 176 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 YKT6O15498 198 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 SCO1O75880 301 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 CCNB2O95067 398 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 ASS1P00966 412 aaKnown RBP5.2□□□□□ -1.58
LSM1-202ENST00000520286 S100A6P06703 90 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 RPS17P08708 135 aaKnown RBP5.2□□□□□ -1.58
LSM1-202ENST00000520286 ACSM4P0C7M7 580 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 SLC35E2BP0CK96 405 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 CD36P16671 472 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 MAP2K4P45985 399 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 SLC11A1P49279 550 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 TAF6P49848 677 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 CCR8P51685 355 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 CRISP1P54107 249 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 SNAP25P60880 206 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 YWHAEP62258 255 aaKnown RBP5.2□□□□□ -1.58
LSM1-202ENST00000520286 ZNF630Q2M218 657 aaPredicted RBP5.2□□□□□ -1.58
LSM1-202ENST00000520286 CLLU1Q5K131 121 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 FHL5Q5TD97 284 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 OTPQ5XKR4 325 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 GLYATQ6IB77 296 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 GALNT10Q86SR1 603 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 UBALD2Q8IYN6 164 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 C9orf62Q8N4C0 152 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 TTC29Q8NA56 475 aaPredicted RBP5.2□□□□□ -1.58
LSM1-202ENST00000520286 OR52K1Q8NGK4 314 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 OR10G9Q8NGN4 311 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 OR9G4Q8NGQ1 327 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 OR9I1Q8NGQ6 314 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 OR10R2Q8NGX6 335 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 LINC01006Q8NI28 216 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 CPB2Q96IY4 423 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 PPP1R36Q96LQ0 422 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 CCDC115Q96NT0 180 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 OR5B12Q96R08 314 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 MRPL57Q9BQC6 102 aaKnown RBP5.2□□□□□ -1.58
LSM1-202ENST00000520286 UCK2Q9BZX2 261 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 SPNS1Q9H2V7 528 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 DHX35Q9H5Z1 703 aaKnown RBP5.2□□□□□ -1.58
LSM1-202ENST00000520286 EML4Q9HC35 981 aaKnown RBP5.2□□□□□ -1.58
LSM1-202ENST00000520286 MTCH1Q9NZJ7 389 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 PEF1Q9UBV8 284 aaKnown RBP5.2□□□□□ -1.58
LSM1-202ENST00000520286 SHPKQ9UHJ6 478 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 NUFIP1Q9UHK0 495 aaKnown RBP5.2□□□□□ -1.58
LSM1-202ENST00000520286 C3orf18Q9UK00 162 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 PRELID3BQ9Y3B1 194 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 V9GYH0 126 aa5.2□□□□□ -1.58
LSM1-202ENST00000520286 RIF1Q5UIP0 2472 aaKnown RBP5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms