RNA–Protein interactions for RNA: ENST00000520062.1

HMGB1P46-201, Transcript of high mobility group box 1 pseudogene 46, humanhuman

BASIC

Gene HMGB1P46, Length 610 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P46-201ENST00000520062 CYTH2Q99418 400 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 API5Q9BZZ5 524 aaKnown RBP3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 ABCB9Q9NP78 766 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 FBXO6Q9NRD1 293 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 CD300AQ9UGN4 299 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 USH1CQ9Y6N9 552 aa3.15□□□□□ -1.91
HMGB1P46-201ENST00000520062 SLIT3O75094 1523 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 TMEM150BA6NC51 233 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 OR2AT4A6NND4 320 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 UPK2O00526 184 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 SNRPAP09012 282 aaKnown RBP3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 GTF2H1P32780 548 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 TTPAP49638 278 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 UBE2KP61086 200 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 BSXQ3C1V8 233 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 ATP6AP1LQ52LC2 224 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 HBMQ6B0K9 141 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 MRPL52Q86TS9 123 aaKnown RBP3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 NT5DC3Q86UY8 548 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 CYP4Z1Q86W10 505 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 TMEM25Q86YD3 366 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 LINC00337Q8N6G1 96 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 OR4K17Q8NGC6 315 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 OR52N1Q8NH53 320 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 SMIM8Q96KF7 97 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 CATSPER2Q96P56 530 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 MRPL20Q9BYC9 149 aaKnown RBP3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 TSGA10Q9BZW7 698 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 SPACA1Q9HBV2 294 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 TAS2R5Q9NYW4 299 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 S4R3C0 116 aa3.14□□□□□ -1.91
HMGB1P46-201ENST00000520062 TRAV40A0A0B4J280 105 aa3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 LRCOL1A6NCL2 159 aa3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 ZNF233A6NK53 670 aa3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 CDIPTO14735 213 aa3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 OR7C2O60412 319 aa3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 RPA3P35244 121 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 MAGEA3P43357 314 aa3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 CMC4P56277 68 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 LINC00315P59091 139 aa3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 ZNF616Q08AN1 781 aa3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 BTN1A1Q13410 526 aa3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 ZBTB6Q15916 424 aa3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 LUZP6Q538Z0 58 aa3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 KCTD16Q68DU8 428 aa3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 FAM231DQ6ZW35 169 aa3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 AHSA2Q719I0 299 aa3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 LRRC52Q8N7C0 313 aa3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 IFT81Q8WYA0 676 aa3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 RORBQ92753 470 aa3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 CA10Q9NS85 328 aa3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 ENPP5Q9UJA9 477 aa3.13□□□□□ -1.91
HMGB1P46-201ENST00000520062 EIF4G1Q04637 1599 aaKnown RBP3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 IGLV3-12A0A075B6K2 115 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 LOC102724200A0A096LPH7 203 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 KIR2DS1A0A191URI9 304 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 A0A1B0GTI1 187 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 GOLGA8IPA6NC78 632 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 CRXO43186 299 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 SGCEO43556 437 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 RCBTB2O95199 551 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 RLN2P04090 185 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 TAC1P20366 129 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 MPIP34949 423 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 XKP51811 444 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 OR2B6P58173 313 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 ELF3P78545 371 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 CD164Q04900 197 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 ZNF404Q494X3 552 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 CLLU1OSQ5K130 101 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 ZNF470Q6ECI4 717 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 COMTD1Q86VU5 262 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 LRRC6Q86X45 466 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 CYP4Z2PQ8N1L4 340 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 UBA3Q8TBC4 463 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 NELFBQ8WX92 580 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 GTF2H4Q92759 462 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 LINC00477Q96M19 166 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 BIRC8Q96P09 236 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 IP6K3Q96PC2 410 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 TRNT1Q96Q11 434 aaKnown RBP3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 ZNF717Q9BY31 904 aaPredicted RBP3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 DIABLOQ9NR28 239 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 SDHAF3Q9NRP4 125 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 CYTL1Q9NRR1 136 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 RBM22Q9NW64 420 aaKnown RBP eCLIP3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 INSIG2Q9Y5U4 225 aa3.12□□□□□ -1.91
HMGB1P46-201ENST00000520062 IGKV1-6A0A0C4DH72 117 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 BTNL10A8MVZ5 291 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 C9JQL5 133 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 UBDO15205 165 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 SLC37A4O43826 429 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 SHOX2O60902 331 aaPredicted RBP3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 LHBP01229 141 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 CDK1P06493 297 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 SLC35E2BP0CK96 405 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 NTF3P20783 257 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 TUFMP49411 452 aaKnown RBP3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 TPBGQ13641 420 aa3.11□□□□□ -1.91
HMGB1P46-201ENST00000520062 SYCP1Q15431 976 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms