RNA–Protein interactions for RNA: ENST00000519802.5

PCM1-213, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 796 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-213ENST00000519802 WDR43Q15061 677 aaKnown RBP eCLIP2.79□□□□□ -1.96
PCM1-213ENST00000519802 ZNF726P1Q15940 193 aa2.79□□□□□ -1.96
PCM1-213ENST00000519802 XKR4Q5GH76 650 aa2.79□□□□□ -1.96
PCM1-213ENST00000519802 GPR107Q5VW38 600 aa2.79□□□□□ -1.96
PCM1-213ENST00000519802 KHDRBS2Q5VWX1 349 aaKnown RBP2.79□□□□□ -1.96
PCM1-213ENST00000519802 TWF2Q6IBS0 349 aaKnown RBP2.79□□□□□ -1.96
PCM1-213ENST00000519802 PRMT9Q6P2P2 845 aa2.79□□□□□ -1.96
PCM1-213ENST00000519802 C12orf54Q6X4T0 127 aa2.79□□□□□ -1.96
PCM1-213ENST00000519802 FBXW12Q6X9E4 464 aa2.79□□□□□ -1.96
PCM1-213ENST00000519802 CMC1Q7Z7K0 106 aa2.79□□□□□ -1.96
PCM1-213ENST00000519802 LYPD6BQ8NI32 183 aa2.79□□□□□ -1.96
PCM1-213ENST00000519802 NUBPLQ8TB37 319 aa2.79□□□□□ -1.96
PCM1-213ENST00000519802 FRZBQ92765 325 aa2.79□□□□□ -1.96
PCM1-213ENST00000519802 NEUROG2Q9H2A3 272 aa2.79□□□□□ -1.96
PCM1-213ENST00000519802 EDA2RQ9HAV5 297 aa2.79□□□□□ -1.96
PCM1-213ENST00000519802 CCDC59Q9P031 241 aaKnown RBP2.79□□□□□ -1.96
PCM1-213ENST00000519802 PLIN4Q96Q06 1357 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 LOC100653049A0A140TA62 436 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 TEX46H3BTG2 121 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 NDUFAB1O14561 156 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 EIF4E2O60573 245 aaKnown RBP2.78□□□□□ -1.96
PCM1-213ENST00000519802 HUS1O60921 280 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 KRT34O76011 436 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 VAMP5O95183 116 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 YEATS4O95619 227 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 OTCP00480 354 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 GP1BAP07359 652 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 CCDC172P0C7W6 258 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 IGHV1-8P0DP01 117 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 NEFHP12036 1026 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 TCN2P20062 427 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 NPY1RP25929 384 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 VSX2P58304 361 aaPredicted RBP2.78□□□□□ -1.96
PCM1-213ENST00000519802 UBE2NP61088 152 aaKnown RBP2.78□□□□□ -1.96
PCM1-213ENST00000519802 PDGFRLQ15198 375 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 SMUG1Q53HV7 270 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 FBXW9Q5XUX1 488 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 TTC23LQ6PF05 361 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 MRPL55Q7Z7F7 128 aaKnown RBP2.78□□□□□ -1.96
PCM1-213ENST00000519802 LUZP2Q86TE4 346 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 SPATA24Q86W54 205 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 OFCC1Q8IZS5 231 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 FAM9CQ8IZT9 166 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 LINC00469Q8N7U9 141 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 C15orf56Q8N910 161 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 UBALD1Q8TB05 177 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 C17orf50Q8WW18 174 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 TMEM230Q96A57 120 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 LRRC39Q96DD0 335 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 ZNF681Q96N22 645 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 CCDC94Q9BW85 323 aaPredicted RBP2.78□□□□□ -1.96
PCM1-213ENST00000519802 SAV1Q9H4B6 383 aaPredicted RBP2.78□□□□□ -1.96
PCM1-213ENST00000519802 HMG20AQ9NP66 347 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 AGPAT4Q9NRZ5 378 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 AGPAT3Q9NRZ7 376 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 CCL26Q9Y258 94 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 KCNE3Q9Y6H6 103 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 FRAS1Q86XX4 4008 aa2.78□□□□□ -1.96
PCM1-213ENST00000519802 IGLV1-36A0A0B4J1U3 117 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 OR6C74A6NCV1 312 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 ARL5CA6NH57 179 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 SMKR1H3BMG3 65 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 YKT6O15498 198 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 CHST1O43916 411 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 OR56A5P0C7T3 313 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 DTYMKP23919 212 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 SSTR5P35346 364 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 RAB7AP51149 207 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 ESRRGP62508 458 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 CDH17Q12864 832 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 TRAM2Q15035 370 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 IRF4Q15306 451 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 ABCA11PQ4W5N1 156 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 ORMDL2Q53FV1 153 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 AP1ARQ63HQ0 302 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 CALHM1Q8IU99 346 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 LGI3Q8N145 548 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 WFDC11Q8NEX6 87 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 NOXO1Q8NFA2 376 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 OR4C5Q8NGB2 326 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 OR51E1Q8TCB6 317 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 APH1BQ8WW43 257 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 GEMIN7Q9H840 131 aaKnown RBP2.77□□□□□ -1.97
PCM1-213ENST00000519802 WFDC1Q9HC57 220 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 CCNB1IP1Q9NPC3 277 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 SIRT7Q9NRC8 400 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 ZNF355PQ9NSJ1 428 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 LYARQ9NX58 379 aaKnown RBP2.77□□□□□ -1.97
PCM1-213ENST00000519802 ZNRD1Q9P1U0 126 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 ZNF282Q9UDV7 671 aaPredicted RBP2.77□□□□□ -1.97
PCM1-213ENST00000519802 SLC17A4Q9Y2C5 497 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 GMEB1Q9Y692 573 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 ABCA13Q86UQ4 5058 aa2.77□□□□□ -1.97
PCM1-213ENST00000519802 CITO14578 2027 aa2.76□□□□□ -1.97
PCM1-213ENST00000519802 USF3Q68DE3 2245 aa2.76□□□□□ -1.97
PCM1-213ENST00000519802 ZNF532Q9HCE3 1301 aa2.76□□□□□ -1.97
PCM1-213ENST00000519802 TRBV9A0A0B4J1U6 114 aa2.76□□□□□ -1.97
PCM1-213ENST00000519802 TMEM223A0PJW6 202 aa2.76□□□□□ -1.97
PCM1-213ENST00000519802 ZNF879B4DU55 563 aa2.76□□□□□ -1.97
PCM1-213ENST00000519802 MKRN2OSH3BPM6 223 aa2.76□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms