RNA–Protein interactions for RNA: ENST00000519664.1

SYNPO-204, Transcript of synaptopodin, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNPO, Length 4,571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO-204ENST00000519664 ZNF816-ZNF321PA0A0X1KG74 233 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 UMAD1C9J7I0 102 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 POU2F2P09086 479 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 VSIG8P0DPA2 414 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 C9orf152Q5JTZ5 239 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 MRGPREQ86SM8 312 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 ZNRF4Q8WWF5 429 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 ZNF385AQ96PM9 386 aaKnown RBP10.36□□□□□ -0.75
SYNPO-204ENST00000519664 FN3KRPQ9HA64 309 aa10.36□□□□□ -0.75
SYNPO-204ENST00000519664 PSME4Q14997 1843 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 TMEM229AB2RXF0 380 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 ADAM11O75078 769 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 ASAH2BP0C7U1 165 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 DCAF12L2Q5VW00 463 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 MRPL41Q8IXM3 137 aaKnown RBP10.35□□□□□ -0.75
SYNPO-204ENST00000519664 ZDHHC23Q8IYP9 409 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 ADPRHL1Q8NDY3 354 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 HPSE2Q8WWQ2 592 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 AKR1E2Q96JD6 320 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 WDR13Q9H1Z4 485 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 SBF1O95248 1867 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 SOX15O60248 233 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 TXNDC12O95881 172 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 SMIM10L1P0DMW3 83 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 FUT3P21217 361 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 MNX1P50219 401 aaPredicted RBP10.35□□□□□ -0.75
SYNPO-204ENST00000519664 SPICQ8N5J4 248 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 SMIM10Q96HG1 83 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 CADP27708 2225 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 CACNA1BQ00975 2339 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 THBS4P35443 961 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 SSBP1Q04837 148 aaKnown RBP10.35□□□□□ -0.75
SYNPO-204ENST00000519664 OR1C1Q15619 314 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 OR8B8Q15620 311 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 CATSPERDQ86XM0 798 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 SLC25A45Q8N413 288 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 OR11H4Q8NGC9 324 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 RXFP4Q8TDU9 374 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 GPX8Q8TED1 209 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 SLC25A38Q96DW6 304 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 MALSU1Q96EH3 234 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 RHOFQ9HBH0 211 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 DYNLRB1Q9NP97 96 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 ABCA4P78363 2273 aa10.35□□□□□ -0.75
SYNPO-204ENST00000519664 ZNF646O15015 1829 aaPredicted RBP10.35□□□□□ -0.75
SYNPO-204ENST00000519664 E5RGE8 158 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 RECKO95980 971 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 IGHV3-13P01766 116 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 IGHV3-7P01780 117 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 ECI1P42126 302 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 MOGAT2Q3SYC2 334 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 RPUSD3Q6P087 351 aaKnown RBP10.34□□□□□ -0.75
SYNPO-204ENST00000519664 GLRX5Q86SX6 157 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 DYRK2Q92630 601 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 INTS12Q96CB8 462 aaKnown RBP10.34□□□□□ -0.75
SYNPO-204ENST00000519664 CTHRC1Q96CG8 243 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 SLC17A5Q9NRA2 495 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 NSG2Q9Y328 171 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 MGAMO43451 1857 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 MPPED1O15442 326 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 GSTZ1O43708 216 aaPredicted RBP10.34□□□□□ -0.75
SYNPO-204ENST00000519664 CFDP00746 253 aaPredicted RBP10.34□□□□□ -0.75
SYNPO-204ENST00000519664 GABRA1P14867 456 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 CA6P23280 308 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 RSPO4Q2I0M5 234 aaPredicted RBP10.34□□□□□ -0.75
SYNPO-204ENST00000519664 ZNF610Q8N9Z0 462 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 NUBPLQ8TB37 319 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 ABHD3Q8WU67 409 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 FZR1Q9UM11 496 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 TRAV39A0A0B4J263 110 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 HMSDA8MTL9 139 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 HMGB3O15347 200 aaKnown RBP10.34□□□□□ -0.75
SYNPO-204ENST00000519664 KRASP01116 189 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 ADRA2CP18825 462 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 KCNJ3P48549 501 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 RAC1P63000 192 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 IL11RAQ14626 422 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 DRAM2Q6UX65 266 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 TMPRSS7Q7RTY8 843 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 ADAD2Q8NCV1 583 aaKnown RBP10.34□□□□□ -0.75
SYNPO-204ENST00000519664 TMEM104Q8NE00 496 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 PRRX2Q99811 253 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 HDHD3Q9BSH5 251 aaPredicted RBP10.34□□□□□ -0.75
SYNPO-204ENST00000519664 DIDO1Q9BTC0 2240 aaKnown RBP10.34□□□□□ -0.75
SYNPO-204ENST00000519664 CEP350Q5VT06 3117 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 IGHV5-10-1A0A0J9YXX1 117 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 BTBD17A6NE02 478 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 GPR31O00270 319 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 VSIG10L2P0DP72 767 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 SPP1P10451 314 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 TNFSF4P23510 183 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 FUT6P51993 359 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 TAS2R30P59541 319 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 PMP22Q01453 160 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 C4orf17Q53FE4 359 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 COL13A1Q5TAT6 717 aaPredicted RBP10.34□□□□□ -0.75
SYNPO-204ENST00000519664 FHL5Q5TD97 284 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 RPL7L1Q6DKI1 246 aaKnown RBP10.34□□□□□ -0.75
SYNPO-204ENST00000519664 OR5AP2Q8NGF4 316 aa10.34□□□□□ -0.75
SYNPO-204ENST00000519664 OR4A16Q8NH70 328 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms