RNA–Protein interactions for RNA: ENST00000519623.1

CSMD1-205, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 4

Gene CSMD1, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-205ENST00000519623 SIGLEC9Q9Y336 463 aa10.11□□□□□ -0.79
CSMD1-205ENST00000519623 DSCAML1Q8TD84 2053 aa10.1□□□□□ -0.79
CSMD1-205ENST00000519623 DHRS7CA6NNS2 312 aa10.1□□□□□ -0.79
CSMD1-205ENST00000519623 SLC1A7O00341 560 aa10.1□□□□□ -0.79
CSMD1-205ENST00000519623 NXPH2O95156 264 aa10.1□□□□□ -0.79
CSMD1-205ENST00000519623 TK1P04183 234 aa10.1□□□□□ -0.79
CSMD1-205ENST00000519623 CCL3L1P16619 93 aa10.1□□□□□ -0.79
CSMD1-205ENST00000519623 CCL1P22362 96 aa10.1□□□□□ -0.79
CSMD1-205ENST00000519623 GABRA5P31644 462 aa10.1□□□□□ -0.79
CSMD1-205ENST00000519623 POLR2IP36954 125 aaKnown RBP10.1□□□□□ -0.79
CSMD1-205ENST00000519623 DLX6P56179 175 aa10.1□□□□□ -0.79
CSMD1-205ENST00000519623 BNIP1Q12981 228 aa10.1□□□□□ -0.79
CSMD1-205ENST00000519623 LY6EQ16553 131 aa10.1□□□□□ -0.79
CSMD1-205ENST00000519623 LRRC75BQ2VPJ9 315 aa10.1□□□□□ -0.79
CSMD1-205ENST00000519623 BATF2Q8N1L9 274 aa10.1□□□□□ -0.79
CSMD1-205ENST00000519623 OR51G2Q8NGK0 314 aa10.1□□□□□ -0.79
CSMD1-205ENST00000519623 UBE2FQ969M7 185 aa10.1□□□□□ -0.79
CSMD1-205ENST00000519623 PRRG3Q9BZD7 231 aa10.1□□□□□ -0.79
CSMD1-205ENST00000519623 POLDIP2Q9Y2S7 368 aa10.1□□□□□ -0.79
CSMD1-205ENST00000519623 TET2Q6N021 2002 aaPredicted RBP10.09□□□□□ -0.79
CSMD1-205ENST00000519623 A0A1W2PQL4 384 aaPredicted RBP10.09□□□□□ -0.79
CSMD1-205ENST00000519623 FAM90A8PA6NJQ4 464 aa10.09□□□□□ -0.79
CSMD1-205ENST00000519623 C17orf98A8MV24 154 aa10.09□□□□□ -0.79
CSMD1-205ENST00000519623 F8VVB4 439 aa10.09□□□□□ -0.79
CSMD1-205ENST00000519623 F8VWA3 439 aa10.09□□□□□ -0.79
CSMD1-205ENST00000519623 K7N7A8 449 aa10.09□□□□□ -0.79
CSMD1-205ENST00000519623 RPP14O95059 124 aaKnown RBP10.09□□□□□ -0.79
CSMD1-205ENST00000519623 EFNB2P52799 333 aa10.09□□□□□ -0.79
CSMD1-205ENST00000519623 IL24Q13007 206 aa10.09□□□□□ -0.79
CSMD1-205ENST00000519623 ZNF273Q14593 569 aa10.09□□□□□ -0.79
CSMD1-205ENST00000519623 UBE2V2Q15819 145 aa10.09□□□□□ -0.79
CSMD1-205ENST00000519623 AMIGO2Q86SJ2 522 aa10.09□□□□□ -0.79
CSMD1-205ENST00000519623 CATSPERDQ86XM0 798 aa10.09□□□□□ -0.79
CSMD1-205ENST00000519623 ZDHHC13Q8IUH4 622 aa10.09□□□□□ -0.79
CSMD1-205ENST00000519623 GID4Q8IVV7 300 aa10.09□□□□□ -0.79
CSMD1-205ENST00000519623 FAM110DQ8TAY7 271 aaPredicted RBP10.09□□□□□ -0.79
CSMD1-205ENST00000519623 PKIBQ9C010 78 aa10.09□□□□□ -0.79
CSMD1-205ENST00000519623 GABARAPL1Q9H0R8 117 aa10.09□□□□□ -0.79
CSMD1-205ENST00000519623 USE1Q9NZ43 259 aa10.09□□□□□ -0.79
CSMD1-205ENST00000519623 MTCH1Q9NZJ7 389 aa10.09□□□□□ -0.79
CSMD1-205ENST00000519623 OR14J1Q9UGF5 321 aa10.09□□□□□ -0.79
CSMD1-205ENST00000519623 WARS2Q9UGM6 360 aaKnown RBP10.09□□□□□ -0.79
CSMD1-205ENST00000519623 AP4S1Q9Y587 144 aa10.09□□□□□ -0.79
CSMD1-205ENST00000519623 PRKDCP78527 4128 aaKnown RBP10.09□□□□□ -0.79
CSMD1-205ENST00000519623 IGKV1-27A0A075B6S5 117 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 hCG_1809904A0A1W2PP81 198 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 A0A1W2PPE2 198 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 A0A1W2PPH5 198 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 A0A1W2PR64 198 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 A0A1W2PRV1 198 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 METTL15A6NJ78 407 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 DYNC1I1O14576 645 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 ZNF737O75373 536 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 KRT8P05787 483 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 OR2T7P0C7T2 308 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 COX7A1P24310 79 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 FASP25445 335 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 BMXP51813 675 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 COL10A1Q03692 680 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 HERPUD1Q15011 391 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 ODF4Q2M2E3 257 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 LHFPL4Q7Z7J7 247 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 DYNAPQ8N1N2 210 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 YIPF7Q8N8F6 280 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 TRMT10AQ8TBZ6 339 aaKnown RBP10.08□□□□□ -0.8
CSMD1-205ENST00000519623 CFHR4Q92496 578 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 RNF166Q96A37 237 aaPredicted RBP10.08□□□□□ -0.8
CSMD1-205ENST00000519623 TBX5Q99593 518 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 CIB1Q99828 191 aa10.08□□□□□ -0.8
CSMD1-205ENST00000519623 FAM230AA0A1W2PPH8 454 aa10.07□□□□□ -0.8
CSMD1-205ENST00000519623 VGLL3A8MV65 326 aa10.07□□□□□ -0.8
CSMD1-205ENST00000519623 H3BSH0 61 aa10.07□□□□□ -0.8
CSMD1-205ENST00000519623 CHST1O43916 411 aa10.07□□□□□ -0.8
CSMD1-205ENST00000519623 SULT1C4O75897 302 aa10.07□□□□□ -0.8
CSMD1-205ENST00000519623 CHRM2P08172 466 aa10.07□□□□□ -0.8
CSMD1-205ENST00000519623 CSF1P09603 554 aa10.07□□□□□ -0.8
CSMD1-205ENST00000519623 PIPP12273 146 aaPredicted RBP10.07□□□□□ -0.8
CSMD1-205ENST00000519623 HTR1FP30939 366 aa10.07□□□□□ -0.8
CSMD1-205ENST00000519623 LGALS4P56470 323 aa10.07□□□□□ -0.8
CSMD1-205ENST00000519623 C2orf68Q2NKX9 166 aa10.07□□□□□ -0.8
CSMD1-205ENST00000519623 LDLRAD2Q5SZI1 272 aa10.07□□□□□ -0.8
CSMD1-205ENST00000519623 HIST2H2BDQ6DRA6 164 aa10.07□□□□□ -0.8
CSMD1-205ENST00000519623 ZNF782Q6ZMW2 699 aaPredicted RBP10.07□□□□□ -0.8
CSMD1-205ENST00000519623 PRSS35Q8N3Z0 413 aa10.07□□□□□ -0.8
CSMD1-205ENST00000519623 RANBP3Q9H6Z4 567 aaPredicted RBP10.07□□□□□ -0.8
CSMD1-205ENST00000519623 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.07□□□□□ -0.8
CSMD1-205ENST00000519623 FOXJ3Q9UPW0 622 aa10.07□□□□□ -0.8
CSMD1-205ENST00000519623 SLC7A11Q9UPY5 501 aa10.07□□□□□ -0.8
CSMD1-205ENST00000519623 NOTCH3Q9UM47 2321 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 TMEM82A0PJX8 343 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 ODF3BA8MYP8 253 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 SYT7O43581 403 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 APOL3O95236 402 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 ZNF728P0DKX0 622 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 RAB13P51153 203 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 FUT6P51993 359 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 ISL1P61371 349 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 C11orf88Q6PI97 169 aa10.06□□□□□ -0.8
CSMD1-205ENST00000519623 CCBE1Q6UXH8 406 aaPredicted RBP10.06□□□□□ -0.8
CSMD1-205ENST00000519623 Q6ZTK2 550 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms