RNA–Protein interactions for RNA: ENST00000519479.1

PCDHGB4-201, Transcript of protocadherin gamma subfamily B, 4, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB4, Length 4,578 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4-201ENST00000519479 ALX4Q9H161 411 aaPredicted RBP9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 ZNF629Q9UEG4 869 aaPredicted RBP9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 FUT3P21217 361 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 TMEM255AQ5JRV8 349 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 TMEM104Q8NE00 496 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 CT55Q8WUE5 264 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 FBXW5Q969U6 566 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 CXorf58Q96LI9 332 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 ZNF75AQ96N20 296 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 GPR87Q9BY21 358 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 RAB18Q9NP72 206 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 ENY2Q9NPA8 101 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 KIF26BQ2KJY2 2108 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 A0A0J9YW62 118 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 A0A1W2PP11 408 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 LINC00862A6NCI5 91 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 HLA-HP01893 362 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 MST1P26927 711 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 GPM6AP51674 278 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 RAB1AP62820 205 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 C1orf100Q5SVJ3 147 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 FAHD2BQ6P2I3 314 aaPredicted RBP9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 SEZ6L2Q6UXD5 910 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 SUMF2Q8NBJ7 301 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 OR56B2PQ8NGI1 322 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 FGF11Q92914 225 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 FAHD2AQ96GK7 314 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 PECRQ9BY49 303 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 G6PC2Q9NQR9 355 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 KCNK7Q9Y2U2 307 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 LHFPL6Q9Y693 200 aa9.92□□□□□ -0.82
PCDHGB4-201ENST00000519479 ZNF732B4DXR9 585 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 RAB32Q13637 225 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 ZADH2Q8N4Q0 377 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 OR10J5Q8NHC4 309 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 TUBG2Q9NRH3 451 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 VSIG4Q9Y279 399 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 SVILO95425 2214 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 ZP3P21754 424 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 BTCP35070 178 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 ADAD2Q8NCV1 583 aaKnown RBP9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 SF3B5Q9BWJ5 86 aaKnown RBP9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 NDRG3Q9UGV2 375 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 FIGNL2A6NMB9 653 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 C21orf140B9A014 251 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 LINC01387J3KSC0 135 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 RAB27BO00194 218 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 TIMM8AO60220 97 aaPredicted RBP9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 IFNA1P01562 189 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 GABRA4P48169 554 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 MECP2P51608 486 aaKnown RBP9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 C19orf57Q0VDD7 668 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 ZNF266Q14584 549 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 CLEC18BQ6UXF7 455 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 HAS2Q92819 552 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 APOBEC3DQ96AK3 386 aaPredicted RBP9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 HINT2Q9BX68 163 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 FAM206AQ9NX38 181 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 ZNF391Q9UJN7 358 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 UNC80Q8N2C7 3258 aa9.91□□□□□ -0.82
PCDHGB4-201ENST00000519479 TRAF3IP2O43734 574 aaPredicted RBP9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 CFDP00746 253 aaPredicted RBP9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 CCL2P13500 99 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 CD80P33681 288 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 FOXC1Q12948 553 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 PPP1R35Q8TAP8 253 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 EXTL1Q92935 676 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 SGK3Q96BR1 496 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 AKIRIN1Q9H9L7 192 aaPredicted RBP9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 PLXND1Q9Y4D7 1925 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 ZNF891A8MT65 544 aaPredicted RBP9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 E5RGE8 158 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 TUSC2O75896 110 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 CTXN2P0C2S0 81 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 FAM157BP0CG42 384 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 NDUFA6P56556 154 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 MLF1P58340 268 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 LTC4SQ16873 150 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 JMJD6Q6NYC1 403 aaPredicted RBP9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 ZNF573Q86YE8 665 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 KLHDC3Q9BQ90 382 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 MESP1Q9BRJ9 268 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 PLEKHA2Q9HB19 425 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 PCDHB10Q9UN67 800 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 NSG2Q9Y328 171 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 IGKV1D-43A0A0B4J1Z2 117 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 PLSCR5A0PG75 271 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 IGHMP01871 453 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 ZNF260Q3ZCT1 412 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 SPATA46Q5T0L3 261 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 ABHD3Q8WU67 409 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 MITD1Q8WV92 249 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 HS3ST3B1Q9Y662 390 aa9.9□□□□□ -0.82
PCDHGB4-201ENST00000519479 SNRNP200O75643 2136 aaKnown RBP9.9□□□□□ -0.83
PCDHGB4-201ENST00000519479 SPTBN2O15020 2390 aa9.9□□□□□ -0.83
PCDHGB4-201ENST00000519479 A0A1W2PNV4 684 aa9.9□□□□□ -0.83
PCDHGB4-201ENST00000519479 MASP2O00187 686 aa9.9□□□□□ -0.83
PCDHGB4-201ENST00000519479 CRHP06850 196 aa9.9□□□□□ -0.83
PCDHGB4-201ENST00000519479 MRPS34P82930 218 aaKnown RBP9.9□□□□□ -0.83
PCDHGB4-201ENST00000519479 CFHR1Q03591 330 aa9.9□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms