RNA–Protein interactions for RNA: ENST00000518538.5

VEGFA-217, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 535 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-217ENST00000518538 RBM48Q5RL73 367 aaKnown RBP18.27■□□□□ 0.52
VEGFA-217ENST00000518538 CD276Q5ZPR3 534 aa18.27■□□□□ 0.52
VEGFA-217ENST00000518538 BTNL3Q6UXE8 466 aa18.27■□□□□ 0.52
VEGFA-217ENST00000518538 ZNF788Q6ZQV5 615 aa18.27■□□□□ 0.52
VEGFA-217ENST00000518538 C1orf229Q6ZS94 237 aaPredicted RBP18.27■□□□□ 0.52
VEGFA-217ENST00000518538 RAB40AQ8WXH6 277 aa18.27■□□□□ 0.52
VEGFA-217ENST00000518538 RASSF4Q9H2L5 321 aa18.27■□□□□ 0.52
VEGFA-217ENST00000518538 Q9H521 79 aa18.27■□□□□ 0.52
VEGFA-217ENST00000518538 C2CD3Q4AC94 2353 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 ANK3Q12955 4377 aaKnown RBP18.26■□□□□ 0.51
VEGFA-217ENST00000518538 IGKV1D-17A0A075B6S4 117 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 TRBV5-5A0A0J9YX44 114 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 A0A1B0GW55 424 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 RGS10O43665 173 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 FCN3O75636 299 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 PLATP00750 562 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 CD1AP06126 327 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 DUX4L2P0CJ85 424 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 DUX4L3P0CJ86 424 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 DUX4L4P0CJ87 422 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 DUX4L5P0CJ88 424 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 DUX4L6P0CJ89 424 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 DUX4L7P0CJ90 424 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 PSG2P11465 335 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 SRP14P37108 136 aaKnown RBP18.26■□□□□ 0.51
VEGFA-217ENST00000518538 DOC2BQ14184 412 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 DUX4L9Q6RFH8 374 aaPredicted RBP18.26■□□□□ 0.51
VEGFA-217ENST00000518538 SLC25A26Q70HW3 274 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 FAM216BQ8N7L0 139 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 TMEM106AQ96A25 262 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 MED30Q96HR3 178 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 CEP19Q96LK0 163 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 GAFA1Q96PS6 74 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 MTCH1Q9NZJ7 389 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 DUX4Q9UBX2 424 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 OPN4Q9UHM6 478 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 ZNF222Q9UK12 451 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 BLOC1S6Q9UL45 172 aa18.26■□□□□ 0.51
VEGFA-217ENST00000518538 LSM2Q9Y333 95 aaKnown RBP18.26■□□□□ 0.51
VEGFA-217ENST00000518538 NIPBLQ6KC79 2804 aaeCLIP18.26■□□□□ 0.516e-6■□□□□ 8.4
VEGFA-217ENST00000518538 PNMA8CA0A1B0GUJ8 204 aa18.25■□□□□ 0.51
VEGFA-217ENST00000518538 C22orf46C9J442 243 aa18.25■□□□□ 0.51
VEGFA-217ENST00000518538 SIGLEC5O15389 551 aa18.25■□□□□ 0.51
VEGFA-217ENST00000518538 NDUFB3O43676 98 aa18.25■□□□□ 0.51
VEGFA-217ENST00000518538 ENSAO43768 121 aaKnown RBP18.25■□□□□ 0.51
VEGFA-217ENST00000518538 CELP19835 753 aa18.25■□□□□ 0.51
VEGFA-217ENST00000518538 RAB3AP20336 220 aa18.25■□□□□ 0.51
VEGFA-217ENST00000518538 POU3F4P49335 361 aa18.25■□□□□ 0.51
VEGFA-217ENST00000518538 RPS11P62280 158 aaKnown RBP eCLIP18.25■□□□□ 0.51
VEGFA-217ENST00000518538 IL13RA1P78552 427 aa18.25■□□□□ 0.51
VEGFA-217ENST00000518538 PAX8Q06710 450 aa18.25■□□□□ 0.51
VEGFA-217ENST00000518538 SPHARQ15513 63 aa18.25■□□□□ 0.51
VEGFA-217ENST00000518538 ZNF529Q6P280 563 aa18.25■□□□□ 0.51
VEGFA-217ENST00000518538 MKXQ8IYA7 352 aa18.25■□□□□ 0.51
VEGFA-217ENST00000518538 OR13C5Q8NGS8 318 aa18.25■□□□□ 0.51
VEGFA-217ENST00000518538 SLAMF9Q96A28 289 aa18.25■□□□□ 0.51
VEGFA-217ENST00000518538 NUDT16L1Q9BRJ7 211 aaKnown RBP18.25■□□□□ 0.51
VEGFA-217ENST00000518538 MRI1Q9BV20 369 aa18.25■□□□□ 0.51
VEGFA-217ENST00000518538 ARHGAP32A7KAX9 2087 aa18.25■□□□□ 0.51
VEGFA-217ENST00000518538 KIR2DS1A0A191URI9 304 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 RFPL4AA6NLU0 287 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 RFPL4AL1F8VTS6 287 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 DENRO43583 198 aaKnown RBP18.24■□□□□ 0.51
VEGFA-217ENST00000518538 RRP9O43818 475 aaKnown RBP18.24■□□□□ 0.51
VEGFA-217ENST00000518538 ECDO95905 644 aaPredicted RBP18.24■□□□□ 0.51
VEGFA-217ENST00000518538 CYB5AP00167 134 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 TFF1P04155 84 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 HCKP08631 526 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 GABRA2P47869 451 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 IKZF1Q13422 519 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 Q499Y3 187 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 LRRC10Q5BKY1 277 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 ASPHD2Q6ICH7 369 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 PRSS48Q7RTY5 328 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 C1QL2Q7Z5L3 287 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 BATF2Q8N1L9 274 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 ST8SIA4Q92187 359 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 SDSLQ96GA7 329 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 SPACA5Q96QH8 159 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 OR5M11Q96RB7 305 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 TAS2R4Q9NYW5 299 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 AUP1Q9Y679 476 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 ZFHX3Q15911 3703 aa18.24■□□□□ 0.51
VEGFA-217ENST00000518538 GPR37O15354 613 aa18.23■□□□□ 0.51
VEGFA-217ENST00000518538 KNG1P01042 644 aa18.23■□□□□ 0.51
VEGFA-217ENST00000518538 PDZK1IP1Q13113 114 aa18.23■□□□□ 0.51
VEGFA-217ENST00000518538 BTN2A1Q7KYR7 527 aa18.23■□□□□ 0.51
VEGFA-217ENST00000518538 PRIMA1Q86XR5 153 aa18.23■□□□□ 0.51
VEGFA-217ENST00000518538 Q8IYB0 196 aa18.23■□□□□ 0.51
VEGFA-217ENST00000518538 RFT1Q96AA3 541 aa18.23■□□□□ 0.51
VEGFA-217ENST00000518538 CCDC90BQ9GZT6 254 aa18.23■□□□□ 0.51
VEGFA-217ENST00000518538 SPRY1O43609 319 aaPredicted RBP18.22■□□□□ 0.51
VEGFA-217ENST00000518538 LIPFP07098 398 aa18.22■□□□□ 0.51
VEGFA-217ENST00000518538 SELLP14151 372 aa18.22■□□□□ 0.51
VEGFA-217ENST00000518538 MED22Q15528 200 aa18.22■□□□□ 0.51
VEGFA-217ENST00000518538 KISS1Q15726 138 aa18.22■□□□□ 0.51
VEGFA-217ENST00000518538 DGUOKQ16854 277 aa18.22■□□□□ 0.51
VEGFA-217ENST00000518538 CRIP3Q6Q6R5 217 aa18.22■□□□□ 0.51
VEGFA-217ENST00000518538 RNF144BQ7Z419 303 aa18.22■□□□□ 0.51
VEGFA-217ENST00000518538 FGFRL1Q8N441 504 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms