RNA–Protein interactions for RNA: ENST00000517238.1

SNORA40.16-201, Transcript of small nucleolar RNA, H/ACA box 40, humanhuman

BASIC

Gene SNORA40, Length 121 nt, Biotype snoRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORA40.16-201ENST00000517238 FAM57AQ8TBR7 257 aa-2.67□□□□□ -2.84
SNORA40.16-201ENST00000517238 RXFP4Q8TDU9 374 aa-2.67□□□□□ -2.84
SNORA40.16-201ENST00000517238 SPRYD4Q8WW59 207 aaPredicted RBP-2.67□□□□□ -2.84
SNORA40.16-201ENST00000517238 OSTF1Q92882 214 aa-2.67□□□□□ -2.84
SNORA40.16-201ENST00000517238 FGF13Q92913 245 aa-2.67□□□□□ -2.84
SNORA40.16-201ENST00000517238 PRSS27Q9BQR3 290 aa-2.67□□□□□ -2.84
SNORA40.16-201ENST00000517238 ARL6Q9H0F7 186 aa-2.67□□□□□ -2.84
SNORA40.16-201ENST00000517238 HSD3B7Q9H2F3 369 aa-2.67□□□□□ -2.84
SNORA40.16-201ENST00000517238 RBM22Q9NW64 420 aaKnown RBP eCLIP-2.67□□□□□ -2.84
SNORA40.16-201ENST00000517238 MED29Q9NX70 200 aa-2.67□□□□□ -2.84
SNORA40.16-201ENST00000517238 MTFP1Q9UDX5 166 aa-2.67□□□□□ -2.84
SNORA40.16-201ENST00000517238 TMCO1Q9UM00 188 aa-2.67□□□□□ -2.84
SNORA40.16-201ENST00000517238 HHLA3Q9XRX5 114 aa-2.67□□□□□ -2.84
SNORA40.16-201ENST00000517238 ZMYM6O95789 1325 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 FRMPD4Q14CM0 1322 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 MTUS2Q5JR59 1369 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 CCDC7Q96M83 1385 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 LRRC30A6NM36 301 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 M0R2T5 61 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 KERAO60938 352 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 FYNP06241 537 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 UQCRBP14927 111 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 NQO1P15559 274 aaKnown RBP-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 MTPNP58546 118 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 NAB1Q13506 487 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 RAB31Q13636 194 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 PDE6HQ13956 83 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 ARHGAP19Q14CB8 494 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 ZSWIM7Q19AV6 140 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 JAKMIP3Q5VZ66 844 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 HAGHLQ6PII5 290 aaPredicted RBP-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 ANGPTL8Q6UXH0 198 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 ISLR2Q6UXK2 745 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 CYP4Z1Q86W10 505 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 LHFPL1Q86WI0 220 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 TMEM17Q86X19 198 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 CCDC65Q8IXS2 484 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 DHRSXQ8N5I4 330 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 PRELID2Q8N945 189 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 OR5H2Q8NGV7 314 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 PYROXD1Q8WU10 500 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 C2orf15Q8WU43 125 aaKnown RBP-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 UFD1Q92890 307 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 PLEKHB2Q96CS7 222 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 TPD52L3Q96J77 140 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 CNDP2Q96KP4 475 aaKnown RBP-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 C7orf26Q96N11 449 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 RNF2Q99496 336 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 NXF5Q9H1B4 397 aaKnown RBP-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 COPS7BQ9H9Q2 264 aaPredicted RBP-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 TDRKHQ9Y2W6 561 aaKnown RBP-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 LINC00588Q9Y4M8 146 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 CMYA5Q8N3K9 4069 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 HEATR5AQ86XA9 2040 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 PLXND1Q9Y4D7 1925 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 BCL9O00512 1426 aa-2.68□□□□□ -2.84
SNORA40.16-201ENST00000517238 STRCQ7RTU9 1775 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 FREM3P0C091 2139 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 CCL15-CCL14A0A0B4J2E2 113 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 TMEM235A6NFC5 223 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 ANXA2P2A6NMY6 339 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 SLC17A3O00476 420 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 SLC37A4O43826 429 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 KLF7O75840 302 aaPredicted RBP-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 PLEKHA8P1O95397 391 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 LY6G6CO95867 125 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 CCDC175P0C221 793 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 TROVE2P10155 538 aaKnown RBP eCLIP-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 GTF2F2P13984 249 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 IL3RAP26951 378 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 SPRR1AP35321 89 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 CCL11P51671 97 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 GBX2P52951 348 aaPredicted RBP-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 CCL15Q16663 113 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 HES3Q5TGS1 186 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 MFSD14CQ5VZR4 134 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 CST9LP1Q5W188 147 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 OR8A1Q8NGG7 326 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 FIBINQ8TAL6 211 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 NAT14Q8WUY8 206 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 ERO1AQ96HE7 468 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 LIMD2Q9BT23 127 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 PIGUQ9H490 435 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 SMDT1Q9H4I9 107 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 SYNCQ9H7C4 482 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 ACER3Q9NUN7 267 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 COPS7AQ9UBW8 275 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 HS3ST2Q9Y278 367 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 KCNE3Q9Y6H6 103 aa-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 PPRC1Q5VV67 1664 aaKnown RBP-2.69□□□□□ -2.84
SNORA40.16-201ENST00000517238 ANAPC1Q9H1A4 1944 aa-2.7□□□□□ -2.84
SNORA40.16-201ENST00000517238 BCORL1Q5H9F3 1711 aa-2.7□□□□□ -2.84
SNORA40.16-201ENST00000517238 TCRBV9S1A1TA0A576 114 aa-2.7□□□□□ -2.84
SNORA40.16-201ENST00000517238 ANGPT2O15123 496 aa-2.7□□□□□ -2.84
SNORA40.16-201ENST00000517238 CLPXO76031 633 aa-2.7□□□□□ -2.84
SNORA40.16-201ENST00000517238 NDUFA7O95182 113 aa-2.7□□□□□ -2.84
SNORA40.16-201ENST00000517238 ANXA4P09525 319 aaPredicted RBP-2.7□□□□□ -2.84
SNORA40.16-201ENST00000517238 FAM58BPP0C7Q3 252 aa-2.7□□□□□ -2.84
SNORA40.16-201ENST00000517238 C8orf89P0DMQ9 161 aa-2.7□□□□□ -2.84
SNORA40.16-201ENST00000517238 CASP4P49662 377 aa-2.7□□□□□ -2.84
Retrieved 100 of 20,778 RNA–protein pairs in 100 ms