RNA–Protein interactions for RNA: ENST00000517097.1

SCARNA3-201, small Cajal body-specific RNA 3, humanhuman

BASIC

Gene SCARNA3, Length 143 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA3-201ENST00000517097 GABARAPO95166 117 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 ISG15P05161 165 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 CDK1P06493 297 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 TAC1P20366 129 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 OMGP23515 440 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 RPS12P25398 132 aaKnown RBP1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 HTR1EP28566 365 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 APLNRP35414 380 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 CAPZBP47756 277 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 IDH2P48735 452 aaKnown RBP1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 PSMB2P49721 201 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 GDI2P50395 445 aaKnown RBP1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 RAP1GDS1P52306 607 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 KRTAP10-9P60411 292 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 ERVS71-1P61550 626 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 LSM6P62312 80 aaKnown RBP1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 RPL23P62829 140 aaKnown RBP1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 HBG1P69891 147 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 HBG2P69892 147 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 DR1Q01658 176 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 PRDX1Q06830 199 aaKnown RBP1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 CYP24A1Q07973 514 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 AESQ08117 197 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 LAMTOR4Q0VGL1 99 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 TSPAN31Q12999 210 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 NAB1Q13506 487 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 FAM53BQ14153 422 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 TMEM183BQ1AE95 376 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 RSPO1Q2MKA7 263 aaPredicted RBP1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 SPIN4Q56A73 249 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 TCEAL5Q5H9L2 206 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 HES5Q5TA89 166 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 SYPL2Q5VXT5 272 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 KCTD16Q68DU8 428 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 LAMTOR1Q6IAA8 161 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 XKRXQ6PP77 449 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 CEMP1Q6PRD7 247 aaPredicted RBP1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 CD200R1LQ6Q8B3 271 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 OPN5Q6U736 354 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 LYPD2Q6UXB3 125 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 LRRN1Q6UXK5 716 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 IL34Q6ZMJ4 242 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 ZNF497Q6ZNH5 498 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 FAM92BQ6ZTR7 304 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 SLC13A5Q86YT5 568 aaPredicted RBP1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 C11orf53Q8IXP5 236 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 TMEM183AQ8IXX5 376 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 CPNE9Q8IYJ1 553 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 PRSS58Q8IYP2 241 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 GPD1LQ8N335 351 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 C14orf178Q8N769 122 aaPredicted RBP1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 CCNYL1Q8N7R7 359 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 WDSUB1Q8N9V3 476 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 OR10G6Q8NH81 332 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 STOML3Q8TAV4 291 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 CASTOR1Q8WTX7 329 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 TCEAL3Q969E4 200 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 TESCQ96BS2 214 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 ZNF689Q96CS4 500 aaPredicted RBP1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 C16orf74Q96GX8 76 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 TMEM101Q96IK0 257 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 QKIQ96PU8 341 aaKnown RBP eCLIP1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 STACQ99469 402 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 TIMM17AQ99595 171 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 DHRS9Q9BPW9 319 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 FAAP24Q9BTP7 215 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 METTL9Q9H1A3 318 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 FAM206AQ9NX38 181 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 VNN3Q9NY84 501 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 SLC22A13Q9Y226 551 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 CHD5Q8TDI0 1954 aa1.84□□□□□ -2.11
SCARNA3-201ENST00000517097 DOCK3Q8IZD9 2030 aa1.84□□□□□ -2.12
SCARNA3-201ENST00000517097 TTC21AQ8NDW8 1320 aa1.84□□□□□ -2.12
SCARNA3-201ENST00000517097 ZNF646O15015 1829 aaPredicted RBP1.84□□□□□ -2.12
SCARNA3-201ENST00000517097 ITGB4P16144 1822 aa1.84□□□□□ -2.12
SCARNA3-201ENST00000517097 PCM1Q15154 2024 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 VIRMAQ69YN4 1812 aaKnown RBP1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 BRWD3Q6RI45 1802 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 KLF18A0A0U1RQI7 1052 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 A0A1B0GXF2 115 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 EPOPA6NHQ4 379 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 ZFP92A6NM28 416 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 DNASE2O00115 360 aaPredicted RBP1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 TAAR5O14804 337 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 CD5LO43866 347 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 CCDC22O60826 627 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 SOX14O95416 240 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 TCRBP04435 133 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 HLA-DPB1P04440 258 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 MRPL3P09001 348 aaKnown RBP1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 ATF1P18846 271 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 M6PRP20645 277 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 SSTR5P35346 364 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 IFNGR2P38484 337 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 LGALS7P47929 136 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 GFERP55789 205 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 CXCR4P61073 352 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 DYNLL1P63167 89 aaKnown RBP1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 CCL7P80098 99 aa1.83□□□□□ -2.12
SCARNA3-201ENST00000517097 FAM3AP98173 230 aa1.83□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms