RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 L7N2F9 121 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 HCRTO43612 131 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 CHMP2AO43633 222 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 KRT34O76011 436 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 H6PDO95479 791 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 TSPAN13O95857 204 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 EIF4EP06730 217 aaKnown RBP1.8□□□□□ -2.12
LINC01088-211ENST00000515597 CTSLP07711 333 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 CCL4P13236 92 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 ME2P23368 584 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 SLC1A1P43005 524 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 TAS2R31P59538 309 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 CDK5Q00535 292 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 RCAN2Q14206 197 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 DEFB109BQ30KR1 87 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 CEP55Q53EZ4 464 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 ADNP2Q6IQ32 1131 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 MBOAT1Q6ZNC8 495 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 MRPL55Q7Z7F7 128 aaKnown RBP1.8□□□□□ -2.12
LINC01088-211ENST00000515597 ZGRF1Q86YA3 2104 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 TMEM25Q86YD3 366 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 ZNF547Q8IVP9 402 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 ZFP41Q8N8Y5 198 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 LINC00304Q8N9R0 145 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 OR7G2Q8NG99 324 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 RAB3IL1Q8TBN0 382 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 RACGAP1Q9H0H5 632 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 EXOSC4Q9NPD3 245 aaKnown RBP1.8□□□□□ -2.12
LINC01088-211ENST00000515597 TSSC4Q9Y5U2 329 aaPredicted RBP1.8□□□□□ -2.12
LINC01088-211ENST00000515597 CMYA5Q8N3K9 4069 aa1.8□□□□□ -2.12
LINC01088-211ENST00000515597 MYH9P35579 1960 aaKnown RBP1.79□□□□□ -2.12
LINC01088-211ENST00000515597 ZNF638Q14966 1978 aaKnown RBP1.79□□□□□ -2.12
LINC01088-211ENST00000515597 ZANQ9Y493 2812 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 ZNF716A6NP11 495 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 SIRPB1O00241 398 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 NVLO15381 856 aaKnown RBP1.79□□□□□ -2.12
LINC01088-211ENST00000515597 CLOCKO15516 846 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 EIF4E2O60573 245 aaKnown RBP1.79□□□□□ -2.12
LINC01088-211ENST00000515597 WBP4O75554 376 aaKnown RBP1.79□□□□□ -2.12
LINC01088-211ENST00000515597 OR2J3O76001 311 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 HLA-DQB1P01920 261 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 ARG1P05089 322 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 APODP05090 189 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 LAMTOR4Q0VGL1 99 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 ALX1Q15699 326 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 ZNF726P1Q15940 193 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 GPR107Q5VW38 600 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 NKAIN4Q8IVV8 208 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 IQCKQ8N0W5 287 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 MIR7-3HGQ8N6C7 128 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 ST20-AS1Q8NBB2 130 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 TTLQ8NG68 377 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 OR11H7Q8NGC8 314 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 OR4C6Q8NH72 309 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 EEF1AKMT3Q96AZ1 226 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 DUS3LQ96G46 650 aaKnown RBP1.79□□□□□ -2.12
LINC01088-211ENST00000515597 FRMD8P1Q9BZ68 369 aaPredicted RBP1.79□□□□□ -2.12
LINC01088-211ENST00000515597 FGF23Q9GZV9 251 aaPredicted RBP1.79□□□□□ -2.12
LINC01088-211ENST00000515597 OR51M1Q9H341 326 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 TCEAL2Q9H3H9 227 aaPredicted RBP1.79□□□□□ -2.12
LINC01088-211ENST00000515597 CCDC59Q9P031 241 aaKnown RBP1.79□□□□□ -2.12
LINC01088-211ENST00000515597 CBY1Q9Y3M2 126 aa1.79□□□□□ -2.12
LINC01088-211ENST00000515597 MDC1Q14676 2089 aaKnown RBP1.79□□□□□ -2.12
LINC01088-211ENST00000515597 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.78□□□□□ -2.12
LINC01088-211ENST00000515597 MYO7BQ6PIF6 2116 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 IGKV3D-11A0A0A0MRZ8 115 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 FAM47DPA6NHR8 397 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 SMKR1H3BMG3 65 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 LGALS9O00182 355 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 EIF1BO60739 113 aaKnown RBP1.78□□□□□ -2.12
LINC01088-211ENST00000515597 CBR3O75828 277 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 CIB2O75838 187 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 PLEKHA8P1O95397 391 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 GP1BAP07359 652 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 CT45A6P0DMU7 189 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 CT45A5P0DMU8 189 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 CT45A7P0DMV0 189 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 PTMSP20962 102 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 ARL2P36404 184 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 EIF1P41567 113 aaKnown RBP1.78□□□□□ -2.12
LINC01088-211ENST00000515597 RBM34P42696 430 aaKnown RBP1.78□□□□□ -2.12
LINC01088-211ENST00000515597 KIR3DL2P43630 455 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 EIF3EP60228 445 aaKnown RBP1.78□□□□□ -2.12
LINC01088-211ENST00000515597 CCL7P80098 99 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 SPAG1Q07617 926 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 ART3Q13508 389 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 MAJINQ3KP22 176 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 XKR7Q5GH72 579 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 CT45A1Q5HYN5 189 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 KCTD16Q68DU8 428 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 H3F3CQ6NXT2 135 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 TAS2R42Q7RTR8 314 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 SLC16A14Q7RTX9 510 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 CMC1Q7Z7K0 106 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 BBS7Q8IWZ6 715 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 CBR4Q8N4T8 237 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 CSGALNACT2Q8N6G5 542 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 NPWQ8N729 165 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 APCDD1LQ8NCL9 501 aa1.78□□□□□ -2.12
LINC01088-211ENST00000515597 OR10AD1Q8NGE0 317 aa1.78□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms