RNA–Protein interactions for RNA: ENST00000515420.1

CLCN3-210, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 735 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-210ENST00000515420 ISG20L2Q9H9L3 353 aaKnown RBP10.56□□□□□ -0.72
CLCN3-210ENST00000515420 DUX4Q9UBX2 424 aa10.56□□□□□ -0.72
CLCN3-210ENST00000515420 DIMT1Q9UNQ2 313 aaKnown RBP10.56□□□□□ -0.72
CLCN3-210ENST00000515420 CAB39Q9Y376 341 aaPredicted RBP10.56□□□□□ -0.72
CLCN3-210ENST00000515420 TRBV23-1A0A0A0MS06 115 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 FAM230AA0A1W2PPH8 454 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 SLC1A7O00341 560 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 ALX3O95076 343 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 NXPH2O95156 264 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 CLIC3O95833 236 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 KNG1P01042 644 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 MT-ND2P03891 347 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 PIPP12273 146 aaPredicted RBP10.55□□□□□ -0.72
CLCN3-210ENST00000515420 ATP1B3P54709 279 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 DGUOKQ16854 277 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 METAP1DQ6UB28 335 aaPredicted RBP10.55□□□□□ -0.72
CLCN3-210ENST00000515420 TMPRSS11AQ6ZMR5 421 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 C1orf122Q6ZSJ8 110 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 LHFPL2Q6ZUX7 228 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 C8orf59Q8N0T1 100 aaPredicted RBP10.55□□□□□ -0.72
CLCN3-210ENST00000515420 OR13C3Q8NGS6 347 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 OR5AK2Q8NH90 309 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 TRMT10AQ8TBZ6 339 aaKnown RBP10.55□□□□□ -0.72
CLCN3-210ENST00000515420 TBX15Q96SF7 602 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 PCGF1Q9BSM1 259 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 PRDM13Q9H4Q3 707 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 SEBOXQ9HB31 216 aaPredicted RBP10.55□□□□□ -0.72
CLCN3-210ENST00000515420 NEK6Q9HC98 313 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 EXOSC1Q9Y3B2 195 aaKnown RBP10.55□□□□□ -0.72
CLCN3-210ENST00000515420 MAB21L2Q9Y586 359 aa10.55□□□□□ -0.72
CLCN3-210ENST00000515420 IGKV1-27A0A075B6S5 117 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 IGKV1-9A0A0C4DH69 117 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 RFPL4AA6NLU0 287 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 ANKRD65E5RJM6 399 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 RFPL4AL1F8VTS6 287 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 H0YJX3 145 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 H3BSH0 61 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 CLDN34H7C241 214 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 M0R1W7 72 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 ZFPL1O95159 310 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 SELLP14151 372 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 ATF1P18846 271 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 MYL12AP19105 171 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 AZGP1P25311 298 aaKnown RBP10.54□□□□□ -0.72
CLCN3-210ENST00000515420 GABRA2P47869 451 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 SRSF2Q01130 221 aaKnown RBP10.54□□□□□ -0.72
CLCN3-210ENST00000515420 RPL22L1Q6P5R6 122 aaKnown RBP10.54□□□□□ -0.72
CLCN3-210ENST00000515420 ANGPTL5Q86XS5 388 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 MKXQ8IYA7 352 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 PARP16Q8N5Y8 322 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 SIGLECL1Q8N7X8 197 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 ZDHHC22Q8N966 263 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 ZNRF1Q8ND25 227 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 OR51A4Q8NGJ6 313 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 RPS4Y2Q8TD47 263 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 NPRL2Q8WTW4 380 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 FBLIM1Q8WUP2 373 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 C22orf15Q8WYQ4 148 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 FGGYQ96C11 551 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 CEP19Q96LK0 163 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 UNKLQ9H9P5 680 aaKnown RBP10.54□□□□□ -0.72
CLCN3-210ENST00000515420 RHOFQ9HBH0 211 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 MTCH1Q9NZJ7 389 aa10.54□□□□□ -0.72
CLCN3-210ENST00000515420 CNOT2Q9NZN8 540 aaKnown RBP10.54□□□□□ -0.72
CLCN3-210ENST00000515420 CENPVL3A0A0U1RRI6 287 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 EFCAB10A6NFE3 127 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 CYB5AP00167 134 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 SFTPBP07988 381 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 NDUFB7P17568 137 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 PRDX2P32119 198 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 ETV1P50549 477 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 ARF6P62330 175 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 UBA52P62987 128 aaKnown RBP10.53□□□□□ -0.72
CLCN3-210ENST00000515420 SLC34A1Q06495 639 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 SLC25A26Q70HW3 274 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 SERPINA12Q8IW75 414 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 BCL6BQ8N143 479 aaPredicted RBP10.53□□□□□ -0.72
CLCN3-210ENST00000515420 FGFRL1Q8N441 504 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 CD177Q8N6Q3 437 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 TMEM185AQ8NFB2 350 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 OR5D14Q8NGL3 314 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 OR10AC1Q8NH08 325 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 OR52N1Q8NH53 320 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 TBC1D15Q8TC07 691 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 GATAD2BQ8WXI9 593 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 H1FXQ92522 213 aaKnown RBP10.53□□□□□ -0.72
CLCN3-210ENST00000515420 TFAP2CQ92754 450 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 TMEM80Q96HE8 168 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 ZNF488Q96MN9 340 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 OPALINQ96PE5 141 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 PDCD1LG2Q9BQ51 273 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 FAM234AQ9H0X4 552 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 ESM1Q9NQ30 184 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 PLCXD1Q9NUJ7 323 aa10.53□□□□□ -0.72
CLCN3-210ENST00000515420 IGHV1-69DA0A0B4J2H0 117 aa10.52□□□□□ -0.73
CLCN3-210ENST00000515420 TRBV2A0A0J9YWF9 115 aa10.52□□□□□ -0.73
CLCN3-210ENST00000515420 E9PI62 339 aa10.52□□□□□ -0.73
CLCN3-210ENST00000515420 RGS9O75916 674 aaPredicted RBP10.52□□□□□ -0.73
CLCN3-210ENST00000515420 IGHV1-69P01742 117 aa10.52□□□□□ -0.73
CLCN3-210ENST00000515420 GNAO1P09471 354 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms