RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 CDH24Q86UP0 819 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 OR8G5Q8NG78 346 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 PRR7Q8TB68 274 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 GTF3AQ92664 365 aaKnown RBP7.8□□□□□ -1.16
CPNE4-213ENST00000515418 CPNE2Q96FN4 548 aaPredicted RBP7.8□□□□□ -1.16
CPNE4-213ENST00000515418 Q96M66 194 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 TMEM100Q9NV29 134 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 MCUBQ9NWR8 336 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 IL36RNQ9UBH0 155 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 ST3GAL6Q9Y274 331 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 DPRXA6NFQ7 191 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 CENPXA8MT69 81 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 FOXI3A8MTJ6 420 aaPredicted RBP7.8□□□□□ -1.16
CPNE4-213ENST00000515418 F5H5P2 479 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 MLNRO43193 412 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 PFDN1O60925 122 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 LPLP06858 475 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 HLA-DMAP28067 261 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 DUSP1P28562 367 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 GNG3P63215 75 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 DAZAP2Q15038 168 aaPredicted RBP7.8□□□□□ -1.16
CPNE4-213ENST00000515418 OR8G1Q15617 311 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 PLA1AQ53H76 456 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 OR52W1Q6IF63 320 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 RGS7BPQ6MZT1 257 aaPredicted RBP7.8□□□□□ -1.16
CPNE4-213ENST00000515418 UNQ6126/PRO20091Q6UXV3 157 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 OSR2Q8N2R0 312 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 DUSP18Q8NEJ0 188 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 PXT1Q8NFP0 134 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 UPRTQ96BW1 309 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 SYT3Q9BQG1 590 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 FAAP24Q9BTP7 215 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 ADAT1Q9BUB4 502 aaKnown RBP7.8□□□□□ -1.16
CPNE4-213ENST00000515418 TM2D1Q9BX74 207 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 CACNG6Q9BXT2 260 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 OR51I2Q9H344 312 aa7.8□□□□□ -1.16
CPNE4-213ENST00000515418 TRAV6A0A075B6T7 132 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 M0QYG6 137 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 ECDO95905 644 aaPredicted RBP7.79□□□□□ -1.16
CPNE4-213ENST00000515418 MELTFP08582 738 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 GSTT2BP0CG30 244 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 HIST1H1DP16402 221 aaKnown RBP7.79□□□□□ -1.16
CPNE4-213ENST00000515418 KITLGP21583 273 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 UQCRFS1P47985 274 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 NKX6-1P78426 367 aaPredicted RBP7.79□□□□□ -1.16
CPNE4-213ENST00000515418 DYRK1AQ13627 763 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 MBNL2Q5VZF2 373 aaKnown RBP7.79□□□□□ -1.16
CPNE4-213ENST00000515418 PLET1Q6UQ28 207 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 SCCPDHQ8NBX0 429 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 LINC01560Q8TB33 94 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 MAFIPQ8WZ33 124 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 DYRK2Q92630 601 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 MICU1Q9BPX6 476 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 PECRQ9BY49 303 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 PLEKHJ1Q9NW61 149 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 NKIRAS2Q9NYR9 191 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 ZNF230Q9UIE0 474 aaPredicted RBP7.79□□□□□ -1.16
CPNE4-213ENST00000515418 A0A0B4J293 547 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 OR5B21A6NL26 309 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 TRAPPC2LH3BP13 241 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 MFNGO00587 321 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 ABCD4O14678 606 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 CDIPTO14735 213 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 ZNF780AO75290 641 aaPredicted RBP7.79□□□□□ -1.16
CPNE4-213ENST00000515418 TCRBP04435 133 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 CPT2P23786 658 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 CHRNB4P30926 498 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 GLRXP35754 106 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 GNG2P59768 71 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 BSPH1Q075Z2 132 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 CD300CQ08708 224 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 ZNF154Q13106 437 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 MAB21L1Q13394 359 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 MPPED2Q15777 294 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 KIAA2026Q5HYC2 2103 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 FAM76BQ5HYJ3 339 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 RSBN1Q5VWQ0 802 aaPredicted RBP7.79□□□□□ -1.16
CPNE4-213ENST00000515418 SLC22A25Q6T423 547 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 ZNF826PQ6ZT77 177 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 ZNF573Q86YE8 665 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 MKXQ8IYA7 352 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 ZSCAN4Q8NAM6 433 aaPredicted RBP7.79□□□□□ -1.16
CPNE4-213ENST00000515418 OR4C16Q8NGL9 310 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 OR56B4Q8NH76 319 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 LILRB4Q8NHJ6 448 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 TMEM171Q8WVE6 324 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 CNTNAP3BQ96NU0 1288 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 HDHD3Q9BSH5 251 aaPredicted RBP7.79□□□□□ -1.16
CPNE4-213ENST00000515418 ST6GALNAC5Q9BVH7 336 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 RTL8AQ9BWD3 113 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 CNTNAP3Q9BZ76 1288 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 IL36GQ9NZH8 169 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 COQ3Q9NZJ6 369 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 FLVCR2Q9UPI3 526 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 SPEF1Q9Y4P9 236 aa7.79□□□□□ -1.16
CPNE4-213ENST00000515418 MYO18BQ8IUG5 2567 aa7.78□□□□□ -1.16
CPNE4-213ENST00000515418 UBE2QL1A1L167 161 aa7.78□□□□□ -1.16
CPNE4-213ENST00000515418 FAM221AA4D161 298 aa7.78□□□□□ -1.16
CPNE4-213ENST00000515418 SULT1C2O00338 296 aa7.78□□□□□ -1.16
CPNE4-213ENST00000515418 SCGNO76038 276 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms