RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 DNAJB12Q9NXW2 375 aaKnown RBP6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 OR6C3Q9NZP0 311 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 SLC22A13Q9Y226 551 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 TRAV27A0A087WT01 109 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 ZNF705FA8MVS1 300 aaPredicted RBP6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 TRGC2P03986 189 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 MRPL3P09001 348 aaKnown RBP6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 ZNF705DP0CH99 300 aaPredicted RBP6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 ZNF705BP0CI00 300 aaPredicted RBP6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 SLC35E2P0CK97 266 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 PPIAL4GP0DN37 164 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 HKR1P10072 659 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 DLSTP36957 453 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 FAM3AP98173 230 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 C4orf17Q53FE4 359 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 LINC00114Q6XXX2 140 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 Q6ZS52 159 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 ESPNLQ6ZVH7 1005 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 MEPCEQ7L2J0 689 aaKnown RBP6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 STPG4Q8N801 248 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 CCDC71LQ8N9Z2 235 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 OR52L2PQ8NGH6 319 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 OR1J1Q8NGS3 322 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 CD180Q99467 661 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 CMC2Q9NRP2 79 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 CGGBP1Q9UFW8 167 aaPredicted RBP6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 SRPK3Q9UPE1 567 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 LRP12Q9Y561 859 aa6.61□□□□□ -1.35
PDLIM5-219ENST00000514743 TGIF2-C20orf24A0A0A6YYL0 155 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 A0A1W2PPK0 400 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 C2CD4DB7Z1M9 353 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 GEMIN2O14893 280 aaKnown RBP6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 REM1O75628 298 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 CSF1P09603 554 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 BIDP55957 195 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 RPS20P60866 119 aaKnown RBP6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 HHEXQ03014 270 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 C1orf61Q13536 156 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 SRSF7Q16629 238 aaKnown RBP eCLIP6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 PRTGQ2VWP7 1150 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 AMZ1Q400G9 498 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 TMEM205Q6UW68 189 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 CALHM1Q8IU99 346 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 SAMD12Q8N8I0 201 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 VSTM2LQ96N03 204 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 PKIBQ9C010 78 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 WDR13Q9H1Z4 485 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 PEF1Q9UBV8 284 aaKnown RBP6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 TVP23AA6NH52 213 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 FGF16O43320 207 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 CLPSP04118 112 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 TFPIP10646 304 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 CLDN12P56749 244 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 IGLV3-21P80748 117 aaPredicted RBP6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 PAX2Q02962 417 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 AIMP2Q13155 320 aaKnown RBP6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 NKPD1Q17RQ9 610 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 COX19Q49B96 90 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 WBP2NLQ6ICG8 309 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 UNQ5815/PRO19632Q6UWF5 114 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 OOSP2Q86WS3 158 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 TMEM183AQ8IXX5 376 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 ZBTB34Q8NCN2 500 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 OR10G3Q8NGC4 313 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 TSLPQ969D9 159 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 LRRC61Q9BV99 259 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 GEMIN7Q9H840 131 aaKnown RBP6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 ASB6Q9NWX5 421 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 FRRS1LQ9P0K9 344 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 A0A1B0GWA3 101 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 TRAPPC2LH3BP13 241 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 M0QXV9 152 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 ELK1P19419 428 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 SLC6A8P48029 635 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 GABRA4P48169 554 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 CAV2P51636 162 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 RAB1AP62820 205 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 ZNF85Q03923 595 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 PLPPR5Q32ZL2 321 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 GPR135Q8IZ08 494 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 RFLNBQ8N5W9 214 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 RNF141Q8WVD5 230 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 NUDCD2Q8WVJ2 157 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 GLMPQ8WWB7 406 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 KIRREL1Q96J84 757 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 CUTCQ9NTM9 273 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 HDGFL3Q9Y3E1 203 aa6.6□□□□□ -1.35
PDLIM5-219ENST00000514743 IGHV2OR16-5A0A0B4J2B6 119 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 K7EPK0 472 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 GOSR2O14653 212 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 HLA-DPB1P04440 258 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 GYPBP06028 91 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 FGF5P12034 268 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 AZU1P20160 251 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 BMP5P22003 454 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 ID4P47928 161 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 ART1P52961 327 aa6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 DVL1P1P54792 670 aaPredicted RBP6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 RPS23P62266 143 aaKnown RBP6.59□□□□□ -1.35
PDLIM5-219ENST00000514743 NAAAQ02083 359 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms