RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 OTCP00480 354 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 OR4Q2P0C623 313 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 HOXB8P17481 243 aaPredicted RBP2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 HLA-DMAP28067 261 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 P2RY2P41231 377 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 TAS2R60P59551 318 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 RPL10AP62906 217 aaKnown RBP2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 IL5RAQ01344 420 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 DYNC1I2Q13409 638 aaKnown RBP2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 KCTD16Q68DU8 428 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 CLEC19AQ6UXS0 136 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 NT5CQ8TCD5 201 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 CACNG8Q8WXS5 425 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 FAM131CQ96AQ9 280 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 COA1Q9GZY4 146 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 GAL3ST2Q9H3Q3 398 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 VSIRQ9H7M9 311 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 PRO0628Q9UI54 55 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 CARHSP1Q9Y2V2 147 aaKnown RBP2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 CHTOPQ9Y3Y2 248 aaKnown RBP2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 CACNA1DQ01668 2161 aa2.4□□□□□ -2.03
HMGCS1-207ENST00000514610 SETD1AO15047 1707 aaKnown RBP2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 AK9Q5TCS8 1911 aa2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 ANKRD20A5PA0PJZ0 165 aa2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 TVP23AA6NH52 213 aa2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 K7EN84 100 aa2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 KCNK2O95069 426 aa2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 STAG3L2P0CL84 134 aa2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 LIPCP11150 499 aa2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 ATP5J2P56134 94 aa2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 TAL2Q16559 108 aa2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 WDR59Q6PJI9 974 aa2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 TRMT10CQ7L0Y3 403 aaKnown RBP2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 NT5DC3Q86UY8 548 aa2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 ZDHHC22Q8N966 263 aa2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 ZNF555Q8NEP9 628 aa2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 FXYD5Q96DB9 178 aa2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 PEBP4Q96S96 227 aa2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 MAP1LC3CQ9BXW4 147 aa2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 MRPL20Q9BYC9 149 aaKnown RBP2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 FLVCR2Q9UPI3 526 aa2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 HIVEP2P31629 2446 aa2.39□□□□□ -2.03
HMGCS1-207ENST00000514610 A0A0J9YYE9 177 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 GOLGA6L4A6NEF3 574 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 SEC14L6B5MCN3 397 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 C4orf51C9J302 202 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 RNF113AO15541 343 aaKnown RBP2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 TRBC1P01850 177 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 IGHG2P01859 326 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 HTR2CP28335 458 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 TUFMP49411 452 aaKnown RBP2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 TRDNQ13061 729 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 TOMM34Q15785 309 aaPredicted RBP2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 OR8K3Q8NH51 312 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 TMEM131Q92545 1883 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 RBPMSQ93062 196 aaKnown RBP2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 SMIM8Q96KF7 97 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 METTL26Q96S19 204 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 TM2D3Q9BRN9 247 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 SHCBP1LQ9BZQ2 653 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 API5Q9BZZ5 524 aaKnown RBP2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 ASB7Q9H672 318 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 ABCB9Q9NP78 766 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 OR2S2Q9NQN1 319 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 RAB23Q9ULC3 237 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 SLC7A11Q9UPY5 501 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 V9GYY9 64 aa2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 COL5A1P20908 1838 aaPredicted RBP2.38□□□□□ -2.03
HMGCS1-207ENST00000514610 H0YC42 278 aa2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 CXorf1O96002 111 aa2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 RHOCP08134 193 aa2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 MEF2BQ02080 365 aaPredicted RBP2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 FMODQ06828 376 aa2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 ELOCQ15369 112 aa2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 SLC9A3R2Q15599 337 aa2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 HNRNPA1L2Q32P51 320 aaKnown RBP2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 HSP90AA4PQ58FG1 418 aa2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 LDLRAD2Q5SZI1 272 aa2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 LIN9Q5TKA1 542 aa2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 ZFAND6Q6FIF0 208 aa2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 APOBEC3HQ6NTF7 200 aaKnown RBP2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 FAM231DQ6ZW35 169 aa2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 KRTAP13-1Q8IUC0 172 aa2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 CYP4Z2PQ8N1L4 340 aa2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 CA13Q8N1Q1 262 aa2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 CCNYL1Q8N7R7 359 aa2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 UTP23Q9BRU9 249 aaKnown RBP2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 SLC38A1Q9H2H9 487 aa2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 ANKHQ9HCJ1 492 aa2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 TAS2R1Q9NYW7 299 aa2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 LTBP4Q8N2S1 1624 aa2.37□□□□□ -2.03
HMGCS1-207ENST00000514610 IGKV1OR2-108A0A075B7D4 117 aa2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 RFXANKO14593 260 aa2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 GATCO43716 136 aaKnown RBP2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 OR2A4O95047 310 aa2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 IGLV6-57P01721 117 aa2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 LGALS3P17931 250 aaKnown RBP2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 SLC6A1P30531 599 aa2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 ACOT2P49753 483 aa2.36□□□□□ -2.03
HMGCS1-207ENST00000514610 DEFB134Q4QY38 66 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms