RNA–Protein interactions for RNA: ENST00000514421.1

CCL28-204, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 3

Gene CCL28, Length 577 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-204ENST00000514421 PIMREGQ9BSJ6 248 aa7.06□□□□□ -1.28
CCL28-204ENST00000514421 MARVELD1Q9BSK0 173 aa7.06□□□□□ -1.28
CCL28-204ENST00000514421 OR10A2Q9H208 303 aa7.06□□□□□ -1.28
CCL28-204ENST00000514421 MSL2Q9HCI7 577 aa7.06□□□□□ -1.28
CCL28-204ENST00000514421 CELSR1Q9NYQ6 3014 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 HIVEP2P31629 2446 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 LOC100289279A0A1B0GTE1 492 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 GGT3PA6NGU5 568 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 ZSCAN5BA6NJL1 495 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 CD300LBA8K4G0 201 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 IQCF6A8MYZ5 107 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 VWC2LB2RUY7 222 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 GABARAPH6UMI1 98 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 LYRM1O43325 122 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 LANCL1O43813 399 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 ALDOBP05062 364 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 CD55P08174 381 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 TNFRSF1AP19438 455 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 RAB6AP20340 208 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 USF1P22415 310 aaPredicted RBP7.05□□□□□ -1.28
CCL28-204ENST00000514421 TNFSF4P23510 183 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 ZNF121P58317 390 aaPredicted RBP7.05□□□□□ -1.28
CCL28-204ENST00000514421 TNFAIP6P98066 277 aaPredicted RBP7.05□□□□□ -1.28
CCL28-204ENST00000514421 ZNF92Q03936 586 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 LOXL1Q08397 574 aaPredicted RBP7.05□□□□□ -1.28
CCL28-204ENST00000514421 RAB11BQ15907 218 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 SNAI3Q3KNW1 292 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 PLA1AQ53H76 456 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 GLYATL3Q5SZD4 288 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 GLT8D1Q68CQ7 371 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 Q6ZR03 302 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 FAM57BQ71RH2 274 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 MRPL21Q7Z2W9 205 aaKnown RBP7.05□□□□□ -1.28
CCL28-204ENST00000514421 OR5AS1Q8N127 324 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 OR2Z1Q8NG97 314 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 OR8B12Q8NGG6 310 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 OR5D14Q8NGL3 314 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 OR6M1Q8NGM8 313 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 OR13C3Q8NGS6 347 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 GTF3AQ92664 365 aaKnown RBP7.05□□□□□ -1.28
CCL28-204ENST00000514421 ITFG2Q969R8 447 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 SPSB4Q96A44 273 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 ELMOD3Q96FG2 381 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 PGAM5Q96HS1 289 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 NEDD4LQ96PU5 975 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 RGCCQ9H4X1 137 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 OPA3Q9H6K4 179 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 CHODLQ9H9P2 273 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 SAP30LQ9HAJ7 183 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 RHBDL2Q9NX52 303 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 TAS2R4Q9NYW5 299 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 ZNF319Q9P2F9 582 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 IL19Q9UHD0 177 aa7.05□□□□□ -1.28
CCL28-204ENST00000514421 VPS13CQ709C8 3753 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 IGHV1-69-2A0A0G2JMI3 117 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 C5orf63A6NC05 138 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 P2RY10O00398 339 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 SYT7O43581 403 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 CDC14BO60729 498 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 MAS1P04201 325 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 CDK2P24941 298 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 HLA-DMAP28067 261 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 BTCP35070 178 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 RAG2P55895 527 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 BTG1P62324 171 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 QRFPP83859 136 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 SSBP1Q04837 148 aaKnown RBP7.04□□□□□ -1.28
CCL28-204ENST00000514421 KLF9Q13886 244 aaPredicted RBP7.04□□□□□ -1.28
CCL28-204ENST00000514421 GPR176Q14439 515 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 ODF4Q2M2E3 257 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 HFEQ30201 348 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 C2orf76Q3KRA6 126 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 UTS2BQ765I0 119 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 DOK3Q7L591 496 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 KRT74Q7RTS7 529 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 CELF2-AS1Q8N7Q2 184 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 MAPK1IP1LQ8NDC0 245 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 DNAAF1Q8NEP3 725 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 OR14K1Q8NGZ2 314 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 OR2AE1Q8NHA4 323 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 CREB3L1Q96BA8 519 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 FAM3DQ96BQ1 224 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 ADAT3Q96EY9 351 aaPredicted RBP7.04□□□□□ -1.28
CCL28-204ENST00000514421 NUDT16L1Q9BRJ7 211 aaKnown RBP7.04□□□□□ -1.28
CCL28-204ENST00000514421 GSX1Q9H4S2 264 aaPredicted RBP7.04□□□□□ -1.28
CCL28-204ENST00000514421 METTL17Q9H7H0 456 aaPredicted RBP7.04□□□□□ -1.28
CCL28-204ENST00000514421 TMEM138Q9NPI0 162 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 COPZ2Q9P299 210 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 ZNF391Q9UJN7 358 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 NOP16Q9Y3C1 178 aaKnown RBP7.04□□□□□ -1.28
CCL28-204ENST00000514421 V9GYS6 101 aa7.04□□□□□ -1.28
CCL28-204ENST00000514421 ZNF469Q96JG9 3925 aaPredicted RBP7.04□□□□□ -1.28
CCL28-204ENST00000514421 A0A096LNT2 108 aa7.03□□□□□ -1.28
CCL28-204ENST00000514421 A0A1B0GVI7 797 aa7.03□□□□□ -1.28
CCL28-204ENST00000514421 A0A1B0GWJ7 208 aa7.03□□□□□ -1.28
CCL28-204ENST00000514421 MEIOCA2RUB1 952 aa7.03□□□□□ -1.28
CCL28-204ENST00000514421 LCE2BO14633 110 aa7.03□□□□□ -1.28
CCL28-204ENST00000514421 PPIHO43447 177 aaKnown RBP7.03□□□□□ -1.28
CCL28-204ENST00000514421 ORC5O43913 435 aa7.03□□□□□ -1.28
CCL28-204ENST00000514421 GMDSO60547 372 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms