RNA–Protein interactions for RNA: ENST00000514271.2

CLIP1-205, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 3,493 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-205ENST00000514271 C18orf12Q96KH6 178 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 TM2D1Q9BX74 207 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 LIME1Q9H400 295 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 MYOTQ9UBF9 498 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 A0A0G2JN53 185 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 A0A1W2PQD3 144 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 BTBD17A6NE02 478 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 HSD17B6O14756 317 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 YPEL1O60688 119 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 TNFRSF6BO95407 300 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 PVALBP20472 110 aaPredicted RBP6.45□□□□□ -1.38
CLIP1-205ENST00000514271 MSX1P28360 303 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 PRSS3P35030 304 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 RPL35P42766 123 aaKnown RBP6.45□□□□□ -1.38
CLIP1-205ENST00000514271 CYB561P49447 251 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 SUMO3P55854 103 aaPredicted RBP6.45□□□□□ -1.38
CLIP1-205ENST00000514271 ZP4Q12836 540 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 PRDX4Q13162 271 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 SURF2Q15527 256 aaPredicted RBP6.45□□□□□ -1.38
CLIP1-205ENST00000514271 OR5AS1Q8N127 324 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 DVL3Q92997 716 aaPredicted RBP6.45□□□□□ -1.38
CLIP1-205ENST00000514271 ARL11Q969Q4 196 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 YPEL2Q96QA6 119 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 TMPRSS5Q9H3S3 457 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 SMCO4Q9NRQ5 59 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 C22orf46C9J442 243 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 AP4M1O00189 453 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 TUSC2O75896 110 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 IGHG1P01857 330 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 TPT1P13693 172 aaKnown RBP6.45□□□□□ -1.38
CLIP1-205ENST00000514271 ELOBQ15370 118 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 TMEM176BQ3YBM2 270 aaPredicted RBP6.45□□□□□ -1.38
CLIP1-205ENST00000514271 HIKESHIQ53FT3 197 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 NKAPLQ5M9Q1 402 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 FOXL2NBQ6ZUU3 175 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 LANCL3Q6ZV70 420 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 BEST3Q8N1M1 668 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 OR4K13Q8NH42 304 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 DTD1Q8TEA8 209 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 PSMF1Q92530 271 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 TMEM106AQ96A25 262 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 LPAR5Q9H1C0 372 aa6.45□□□□□ -1.38
CLIP1-205ENST00000514271 STATHP02808 62 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 OR8G3PP0DMU2 310 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 RAB4AP20338 218 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 HSD11B1P28845 292 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 GCH1P30793 250 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 PEA15Q15121 130 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 RNFT1Q5M7Z0 435 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 ASCL4Q6XD76 172 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 MDS2Q8NDY4 140 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 OR4N2Q8NGD1 307 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 OR51A2Q8NGJ7 313 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 ZNF563Q8TA94 476 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 CPNE4Q96A23 557 aaPredicted RBP6.44□□□□□ -1.38
CLIP1-205ENST00000514271 ADIPOR1Q96A54 375 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 B4GALT7Q9UBV7 327 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 BOKQ9UMX3 212 aaPredicted RBP6.44□□□□□ -1.38
CLIP1-205ENST00000514271 WIF1Q9Y5W5 379 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 DISC1C4P0D8 188 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 NME2P1O60361 137 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 CDC40O60508 579 aaKnown RBP eCLIP6.44□□□□□ -1.38
CLIP1-205ENST00000514271 OR8U9P0C7N5 309 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 VSIG8P0DPA2 414 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 NME2P22392 152 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 MMP16P51512 607 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 CCL11P51671 97 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 ARG2P78540 354 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 ACSF3Q4G176 576 aaPredicted RBP6.44□□□□□ -1.38
CLIP1-205ENST00000514271 TMEM128Q5BJH2 165 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 HAGHLQ6PII5 290 aaPredicted RBP6.44□□□□□ -1.38
CLIP1-205ENST00000514271 PET117Q6UWS5 81 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 OR13D1Q8NGV5 346 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 OR8U1Q8NH10 309 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 PRRT1Q99946 306 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 UFSP2Q9NUQ7 469 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 TMEM140Q9NV12 185 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 KLHL28Q9NXS3 571 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 CSAG2Q9Y5P2 127 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 A0A087WZY1 265 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 TMEM72A0PK05 275 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 CXorf65A6NEN9 183 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 KIAA1324LA8MWY0 1029 aaPredicted RBP6.44□□□□□ -1.38
CLIP1-205ENST00000514271 HRKO00198 91 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 LMX1BO60663 402 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 SEC11BP0C7V7 166 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 BMP7P18075 431 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 FPR2P25090 351 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 FKBP2P26885 142 aaKnown RBP6.44□□□□□ -1.38
CLIP1-205ENST00000514271 CD34P28906 385 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 TNFSF10P50591 281 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 GLO1Q04760 184 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 PON3Q15166 354 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 KCNMB1Q16558 191 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 CLEC18BQ6UXF7 455 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 ZNF440Q8IYI8 595 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 OR13G1Q8NGZ3 307 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 THAP6Q8TBB0 222 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 PAQR8Q8TEZ7 354 aa6.44□□□□□ -1.38
CLIP1-205ENST00000514271 ZBTB8AQ96BR9 441 aa6.44□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms