RNA–Protein interactions for RNA: ENST00000513562.1

DDX41-216, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 552 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-216ENST00000513562 GNPDA2Q8TDQ7 276 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 STMN2Q93045 179 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 DUX3Q96PT4 197 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 INTS14Q96SY0 518 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 TMEM133Q9H2Q1 129 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 DCAF13Q9NV06 445 aaKnown RBP8.65□□□□□ -1.02
DDX41-216ENST00000513562 INTS9Q9NV88 658 aaKnown RBP8.65□□□□□ -1.02
DDX41-216ENST00000513562 IL20Q9NYY1 176 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 OR14J1Q9UGF5 321 aa8.65□□□□□ -1.02
DDX41-216ENST00000513562 SAMD4AQ9UPU9 718 aaKnown RBP8.65□□□□□ -1.02
DDX41-216ENST00000513562 SEMG1P04279 462 aa8.64□□□□□ -1.03
DDX41-216ENST00000513562 SNRNP70P08621 437 aaKnown RBP8.64□□□□□ -1.03
DDX41-216ENST00000513562 MAP2K3P46734 347 aa8.64□□□□□ -1.03
DDX41-216ENST00000513562 EDDM3BP56851 147 aa8.64□□□□□ -1.03
DDX41-216ENST00000513562 SNAPC1Q16533 368 aa8.64□□□□□ -1.03
DDX41-216ENST00000513562 ZFAND6Q6FIF0 208 aa8.64□□□□□ -1.03
DDX41-216ENST00000513562 C8orf82Q6P1X6 216 aaPredicted RBP8.64□□□□□ -1.03
DDX41-216ENST00000513562 SHFQ7M4L6 423 aa8.64□□□□□ -1.03
DDX41-216ENST00000513562 ZNF695Q8IW36 515 aa8.64□□□□□ -1.03
DDX41-216ENST00000513562 ASCC1Q8N9N2 400 aaKnown RBP8.64□□□□□ -1.03
DDX41-216ENST00000513562 ITFG2Q969R8 447 aa8.64□□□□□ -1.03
DDX41-216ENST00000513562 RAX2Q96IS3 184 aa8.64□□□□□ -1.03
DDX41-216ENST00000513562 CITED4Q96RK1 184 aa8.64□□□□□ -1.03
DDX41-216ENST00000513562 KCTD14Q9BQ13 255 aaPredicted RBP8.64□□□□□ -1.03
DDX41-216ENST00000513562 DPM3Q9P2X0 92 aa8.64□□□□□ -1.03
DDX41-216ENST00000513562 SCOCQ9UIL1 159 aa8.64□□□□□ -1.03
DDX41-216ENST00000513562 HHLA2Q9UM44 414 aa8.64□□□□□ -1.03
DDX41-216ENST00000513562 SLC22A13Q9Y226 551 aa8.64□□□□□ -1.03
DDX41-216ENST00000513562 POLDIP2Q9Y2S7 368 aa8.64□□□□□ -1.03
DDX41-216ENST00000513562 SMAD5-AS1Q9Y6J3 95 aa8.64□□□□□ -1.03
DDX41-216ENST00000513562 hADV38S2A0JD32 116 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 CCL24O00175 119 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 ATP6V1B1P15313 513 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 GSTT1P30711 240 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 HAAOP46952 286 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 ARHGDIBP52566 201 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 RAB25P57735 213 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 ERVK11-1P61568 191 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 BDH1Q02338 343 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 PLCXD3Q63HM9 321 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 MOB3CQ70IA8 216 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 GDPD3Q7L5L3 318 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 TRPM8Q7Z2W7 1104 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 ZNF573Q86YE8 665 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 HIST2H2ABQ8IUE6 130 aaPredicted RBP8.63□□□□□ -1.03
DDX41-216ENST00000513562 EGFL6Q8IUX8 553 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 OR8H2Q8N162 312 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 BATF2Q8N1L9 274 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 COMMD1Q8N668 190 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 OR5M8Q8NGP6 311 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 OR4Q3Q8NH05 313 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 CHPT1Q8WUD6 406 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 ATP6V1G3Q96LB4 118 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 NOL4LQ96MY1 436 aaPredicted RBP8.63□□□□□ -1.03
DDX41-216ENST00000513562 HOPXQ9BPY8 73 aaPredicted RBP8.63□□□□□ -1.03
DDX41-216ENST00000513562 NIPAL2Q9H841 368 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 ZNF256Q9Y2P7 627 aaPredicted RBP8.63□□□□□ -1.03
DDX41-216ENST00000513562 MOB4Q9Y3A3 225 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 LYVE1Q9Y5Y7 322 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 LINC00312Q9Y6C7 94 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 HSPE1-MOB4S4R3N1 261 aa8.63□□□□□ -1.03
DDX41-216ENST00000513562 A0A0U1RQV5 110 aa8.62□□□□□ -1.03
DDX41-216ENST00000513562 SEC14L6B5MCN3 397 aa8.62□□□□□ -1.03
DDX41-216ENST00000513562 IGLV1-47P01700 117 aa8.62□□□□□ -1.03
DDX41-216ENST00000513562 LYNP07948 512 aa8.62□□□□□ -1.03
DDX41-216ENST00000513562 MPZP25189 248 aa8.62□□□□□ -1.03
DDX41-216ENST00000513562 RRM2P31350 389 aa8.62□□□□□ -1.03
DDX41-216ENST00000513562 NUDT2P50583 147 aa8.62□□□□□ -1.03
DDX41-216ENST00000513562 RIPPLY1Q0D2K3 151 aa8.62□□□□□ -1.03
DDX41-216ENST00000513562 LCN1P1Q5VSP4 162 aa8.62□□□□□ -1.03
DDX41-216ENST00000513562 ADAMTSL5Q6ZMM2 481 aa8.62□□□□□ -1.03
DDX41-216ENST00000513562 RASSF6Q6ZTQ3 369 aa8.62□□□□□ -1.03
DDX41-216ENST00000513562 OTOSQ8NHW6 89 aa8.62□□□□□ -1.03
DDX41-216ENST00000513562 ZNF596Q8TC21 504 aa8.62□□□□□ -1.03
DDX41-216ENST00000513562 BTBD10Q9BSF8 475 aa8.62□□□□□ -1.03
DDX41-216ENST00000513562 PAPOLBQ9NRJ5 636 aaKnown RBP8.62□□□□□ -1.03
DDX41-216ENST00000513562 BAIAP2Q9UQB8 552 aa8.62□□□□□ -1.03
DDX41-216ENST00000513562 HERC2O95714 4834 aa8.62□□□□□ -1.03
DDX41-216ENST00000513562 TMEM82A0PJX8 343 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 PQLC2LA1A4F0 135 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 LEUTXA8MZ59 168 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 NDUFAB1O14561 156 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 MMP23AO75900 390 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 IFNGP01579 166 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 IGLV3-1P01715 115 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 ZNF3P17036 446 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 EDDM3AQ14507 147 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 ZNF684Q5T5D7 378 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 GLYATQ6IB77 296 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 RTN4RL2Q86UN3 420 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 ABHD12Q8N2K0 398 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 ZNF454Q8N9F8 522 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 OR2T33Q8NG76 320 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 OR9Q2Q8NGE9 314 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 OR8U1Q8NH10 309 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 RP9Q8TA86 221 aaKnown RBP8.61□□□□□ -1.03
DDX41-216ENST00000513562 PYURFQ96I23 114 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 CDRT15Q96T59 188 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 TSSK6Q9BXA6 273 aa8.61□□□□□ -1.03
DDX41-216ENST00000513562 MED20Q9H944 212 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms