RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 TSPAN7P41732 249 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 AKR1C2P52895 323 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 AKR1C1Q04828 323 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 RIPPLY2Q5TAB7 128 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 ABLIM2Q6H8Q1 611 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 ASCL4Q6XD76 172 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 OR2H1Q9GZK4 316 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 LPAR3Q9UBY5 353 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 TCFL5Q9UL49 500 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 ABCD4O14678 606 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 RFPL3SP0C7P2 107 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 CHATP28329 748 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 RRADP55042 308 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 KRTAP27-1Q3LI81 207 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 WIPI1Q5MNZ9 446 aaPredicted RBP15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 TMEM42Q69YG0 159 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 IL34Q6ZMJ4 242 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 FAM219AQ8IW50 185 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 ZNF100Q8IYN0 542 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 OSR2Q8N2R0 312 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 ESX1Q8N693 406 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 ADAMTS17Q8TE56 1095 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 BCO1Q9HAY6 547 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 TAF9BQ9HBM6 251 aa15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 ZNF629Q9UEG4 869 aaPredicted RBP15.59■□□□□ 0.09
CCHCR1-228ENST00000509552 ATP6V1G2-DDX39BF2Z307 99 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 ACTL6AO96019 429 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 FCGR3AP08637 254 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 HKR1P10072 659 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 OPRM1P35372 400 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 FUT6P51993 359 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 PRSS12P56730 875 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 Q0VFX4 171 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 ZNF169Q14929 603 aaPredicted RBP15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 ABCA11PQ4W5N1 156 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 ACER2Q5QJU3 275 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 PDSS1Q5T2R2 415 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 DHRS11Q6UWP2 260 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 TMEM200AQ86VY9 491 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 CLRN3Q8NCR9 226 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 OR5T2Q8NGG2 359 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 SAT2Q96F10 170 aaPredicted RBP15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 ADGRG7Q96K78 797 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 SULT4A1Q9BR01 284 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 WNT5BQ9H1J7 359 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 PCDHB16Q9NRJ7 776 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 PRELID1Q9Y255 219 aa15.58■□□□□ 0.08
CCHCR1-228ENST00000509552 LRRC3CA6NJW4 275 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 FAM74A7A6NL05 159 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 K7EPK0 472 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 ZNF728P0DKX0 622 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 ZNF708P17019 499 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 TCN2P20062 427 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 GDF1P27539 372 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 PIGPP57054 158 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 FAM74A3Q4VXF1 159 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 FAM71E2Q8N5Q1 922 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 TOMM40LQ969M1 308 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 GPR35Q9HC97 309 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 TUBD1Q9UJT1 453 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 CFAP54Q96N23 3096 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 F8W036 122 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 MSTNO14793 375 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 GEMIN2O14893 280 aaKnown RBP15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 RPL12P30050 165 aaKnown RBP15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 CYB561P49447 251 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 BLOC1S1P78537 153 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 FAM3AP98173 230 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 GGNBP1Q5YKI7 109 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 RPL7L1Q6DKI1 246 aaKnown RBP15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 CPNE4Q96A23 557 aaPredicted RBP15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 CDX2Q99626 313 aaPredicted RBP15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 AIFM2Q9BRQ8 373 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 TREM1Q9NP99 234 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 MRPS18CQ9Y3D5 142 aaKnown RBP15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 WDFY3Q8IZQ1 3526 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 CNTRLQ7Z7A1 2325 aa15.57■□□□□ 0.08
CCHCR1-228ENST00000509552 hCG_38984A0A1B0GV85 526 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 TERTO14746 1132 aaKnown RBP15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 FARS2O95363 451 aaKnown RBP15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 PDGFBP01127 241 aaPredicted RBP15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 ZNF92Q03936 586 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 PJVKQ0ZLH3 352 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 SSPNQ14714 243 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 PIGYQ3MUY2 71 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 PLCXD3Q63HM9 321 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 FBXL14Q8N1E6 418 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 NAXEQ8NCW5 288 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 OR10AD1Q8NGE0 317 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 TECTBQ96PL2 329 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 IL36GQ9NZH8 169 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 ST3GAL6Q9Y274 331 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 GPR31O00270 319 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 DEDDO75618 318 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 TSPAN9O75954 239 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 CST4P01036 141 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 PDZK1IP1Q13113 114 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 H3F3CQ6NXT2 135 aa15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 C6orf15Q6UXA7 325 aaPredicted RBP15.56■□□□□ 0.08
CCHCR1-228ENST00000509552 SKA3Q8IX90 412 aa15.56■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 127.8 ms