RNA–Protein interactions for RNA: ENST00000509429.1

NIPBL-206, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 3

Gene NIPBL, Length 586 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-206ENST00000509429 PAFAH1B2P68402 229 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 PITX1P78337 314 aaPredicted RBP3.87□□□□□ -1.79
NIPBL-206ENST00000509429 TFF2Q03403 129 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 ZNF763Q0D2J5 394 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 KLRB1Q12918 225 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 GPR18Q14330 331 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 ZNF235Q14590 738 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 GINS1Q14691 196 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 GNMTQ14749 295 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 KIR2DS5Q14953 304 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 HIST3H3Q16695 136 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 CCSMST1Q4G0I0 132 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 MORN2Q502X0 79 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 NHLRC3Q5JS37 347 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 TMEM69Q5SWH9 247 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 LDLRAD2Q5SZI1 272 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 MFSD12Q6NUT3 480 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 PRSS54Q6PEW0 395 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 DHRS11Q6UWP2 260 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 UNQ6126/PRO20091Q6UXV3 157 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 FBXW12Q6X9E4 464 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 C18orf65Q6ZTR6 163 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 PRSS45Q7RTY3 260 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 TSEN54Q7Z6J9 526 aaKnown RBP3.87□□□□□ -1.79
NIPBL-206ENST00000509429 MOB3BQ86TA1 216 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 RBM23Q86U06 439 aaKnown RBP3.87□□□□□ -1.79
NIPBL-206ENST00000509429 KLHDC8BQ8IXV7 354 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 MUC15Q8N387 334 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 ZNF664Q8N3J9 261 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 ZADH2Q8N4Q0 377 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 BEST4Q8NFU0 473 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 OR5B3Q8NH48 314 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 RHOXF1Q8NHV9 184 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 LRRC15Q8TF66 581 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 NEIL2Q969S2 332 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 MALSU1Q96EH3 234 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 SDSLQ96GA7 329 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 ZNF488Q96MN9 340 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 OXGR1Q96P68 337 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 RBP7Q96R05 134 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 F2RL3Q96RI0 385 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 HSPB9Q9BQS6 159 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 ZNF649Q9BS31 505 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 EFCAB11Q9BUY7 163 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 FAIM2Q9BWQ8 316 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 TAPBPLQ9BX59 468 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 FAM234AQ9H0X4 552 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 RHOJQ9H4E5 214 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 FNDC4Q9H6D8 234 aaPredicted RBP3.87□□□□□ -1.79
NIPBL-206ENST00000509429 MRPS18AQ9NVS2 196 aaKnown RBP3.87□□□□□ -1.79
NIPBL-206ENST00000509429 C1orf123Q9NWV4 160 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 JKAMPQ9P055 326 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 ERG28Q9UKR5 140 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 TNFSF18Q9UNG2 199 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 TRAPPC4Q9Y296 219 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 TP53BP1Q12888 1972 aaPredicted RBP3.87□□□□□ -1.79
NIPBL-206ENST00000509429 ZNF831Q5JPB2 1677 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 DOT1LQ8TEK3 1739 aa3.87□□□□□ -1.79
NIPBL-206ENST00000509429 BORCS7-ASMTA0A0B4J1R7 106 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 PNMA8CA0A1B0GUJ8 204 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 TMEM189A5PLL7 270 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 OR4C46A6NHA9 309 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 FAM159BA6NKW6 160 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 YJEFN3A6XGL0 299 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 A8MVM7 634 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 F5H6K3 240 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 F8VVB4 439 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 F8VWA3 439 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 RPL36A-HNRNPH2H7BZ11 118 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 UPK1AO00322 258 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 NTN3O00634 580 aaPredicted RBP3.86□□□□□ -1.79
NIPBL-206ENST00000509429 UBFD1O14562 309 aaKnown RBP3.86□□□□□ -1.79
NIPBL-206ENST00000509429 PDCD5O14737 125 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 TAPBPO15533 448 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 RBFOX2O43251 390 aaKnown RBP eCLIP3.86□□□□□ -1.79
NIPBL-206ENST00000509429 MRPS14O60783 128 aaKnown RBP3.86□□□□□ -1.79
NIPBL-206ENST00000509429 ICOSLGO75144 302 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 GCM2O75603 506 aaPredicted RBP3.86□□□□□ -1.79
NIPBL-206ENST00000509429 KRTAP5-8O75690 187 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 TTLL1O95922 423 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 APOC3P02656 99 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 OPN1SWP03999 348 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 ALDOCP09972 364 aaKnown RBP3.86□□□□□ -1.79
NIPBL-206ENST00000509429 SMIM17P0DL12 118 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 MGMTP16455 207 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 CRHBPP24387 322 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 RPL12P30050 165 aaKnown RBP3.86□□□□□ -1.79
NIPBL-206ENST00000509429 CMPK1P30085 196 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 THBS3P49746 956 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 SGSHP51688 502 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 CTSCP53634 463 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 ZNF121P58317 390 aaPredicted RBP3.86□□□□□ -1.79
NIPBL-206ENST00000509429 RPS28P62857 69 aaKnown RBP3.86□□□□□ -1.79
NIPBL-206ENST00000509429 IL10RBQ08334 325 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 GPR50Q13585 617 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 RHEBQ15382 184 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 UPP1Q16831 310 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 C4orf26Q17RF5 130 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 SNAI3Q3KNW1 292 aa3.86□□□□□ -1.79
NIPBL-206ENST00000509429 ZNF404Q494X3 552 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms