RNA–Protein interactions for RNA: ENST00000508930.1

TRIM41-204, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 3,834 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-204ENST00000508930 HIST1H1BP16401 226 aaKnown RBP12.58□□□□□ -0.4
TRIM41-204ENST00000508930 GALNSP34059 522 aa12.58□□□□□ -0.4
TRIM41-204ENST00000508930 GFERP55789 205 aa12.58□□□□□ -0.4
TRIM41-204ENST00000508930 ZNF266Q14584 549 aa12.58□□□□□ -0.4
TRIM41-204ENST00000508930 C1orf189Q5VU69 101 aa12.58□□□□□ -0.4
TRIM41-204ENST00000508930 RTL6Q6ICC9 239 aa12.58□□□□□ -0.4
TRIM41-204ENST00000508930 SDHAF3Q9NRP4 125 aa12.58□□□□□ -0.4
TRIM41-204ENST00000508930 SERINC1Q9NRX5 453 aa12.58□□□□□ -0.4
TRIM41-204ENST00000508930 WSB1Q9Y6I7 421 aa12.58□□□□□ -0.4
TRIM41-204ENST00000508930 PCNX3Q9H6A9 2034 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 A0A087WZY1 265 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 JMJD7P0C870 316 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 FAHP16930 419 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 DDTP30046 118 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 CCL20P78556 96 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 TAF9Q16594 264 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 OR5H15A6NDH6 313 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 TLCD2A6NGC4 264 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 OR5H1A6NKK0 313 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 CXCL1P09341 107 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 RPL23AP62750 156 aaKnown RBP12.57□□□□□ -0.4
TRIM41-204ENST00000508930 KHDC3LQ587J8 217 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 REC114Q7Z4M0 266 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 WDFY1Q8IWB7 410 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 HAS2Q92819 552 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 GALNT14Q96FL9 552 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 SHDQ96IW2 340 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 ZNF319Q9P2F9 582 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 LHFPL6Q9Y693 200 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 FTCDNL1E5RQL4 147 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 MASP2O00187 686 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 SEMA4FO95754 770 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 THEM4Q5T1C6 240 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 TMEM217Q8N7C4 229 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 PLPP5Q8NEB5 264 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 OR52M1Q8NGK5 317 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 FAAP24Q9BTP7 215 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 ABHD14AQ9BUJ0 271 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 FBRSQ9HAH7 460 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 NECAP2Q9NVZ3 263 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 ANXA10Q9UJ72 324 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 MCTS1Q9ULC4 181 aaKnown RBP12.57□□□□□ -0.4
TRIM41-204ENST00000508930 RFNGQ9Y644 331 aa12.57□□□□□ -0.4
TRIM41-204ENST00000508930 MED12Q93074 2177 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 HIST1H2BKO60814 126 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 HIST1H2BJP06899 126 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 HIST1H2BOP23527 126 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 ATP6V0CP27449 155 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 HIST1H2BBP33778 126 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 HIST1H2BDP58876 126 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 RND3P61587 244 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 PKIAP61925 76 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 HIST1H2BCP62807 126 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 IL13RA2Q14627 380 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 HIST2H2BEQ16778 126 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.56□□□□□ -0.4
TRIM41-204ENST00000508930 CYB561D1Q8N8Q1 229 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 GTF3AQ92664 365 aaKnown RBP12.56□□□□□ -0.4
TRIM41-204ENST00000508930 HIST1H2BHQ93079 126 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 NTNG2Q96CW9 530 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 HIST1H2BNQ99877 126 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 HIST1H2BMQ99879 126 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 LANCL2Q9NS86 450 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 RANBP2P49792 3224 aaKnown RBP12.56□□□□□ -0.4
TRIM41-204ENST00000508930 IFITM10A6NMD0 228 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 IGKV3-11P04433 115 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 APOBEC1P41238 236 aaKnown RBP12.56□□□□□ -0.4
TRIM41-204ENST00000508930 EWSR1Q01844 656 aaKnown RBP eCLIP12.56□□□□□ -0.4
TRIM41-204ENST00000508930 FOXF1Q12946 379 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 FGF14Q92915 247 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 ZNF775Q96BV0 537 aaPredicted RBP12.56□□□□□ -0.4
TRIM41-204ENST00000508930 KLRF1Q9NZS2 232 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 MUC22E2RYF6 1773 aaPredicted RBP12.56□□□□□ -0.4
TRIM41-204ENST00000508930 IGHV3-20A0A0C4DH32 117 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 IGKV1-9A0A0C4DH69 117 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 IFNA10P01566 189 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 HIKESHIQ53FT3 197 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 SPIN3Q5JUX0 258 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 FAM210BQ96KR6 192 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 SCRT1Q9BWW7 348 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 MAGT1Q9H0U3 335 aa12.56□□□□□ -0.4
TRIM41-204ENST00000508930 ANGPTL7O43827 346 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 ONECUT2O95948 504 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 FOLR1P15328 257 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 ZP4Q12836 540 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 MFAP5Q13361 173 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 SLC22A25Q6T423 547 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 ZNF574Q6ZN55 896 aaPredicted RBP12.55□□□□□ -0.4
TRIM41-204ENST00000508930 C20orf196Q8IYI0 205 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 TMEM123Q8N131 208 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 ARV1Q9H2C2 271 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 UBE2J1Q9Y385 318 aaPredicted RBP12.55□□□□□ -0.4
TRIM41-204ENST00000508930 ELOA3CA0A087WX78 387 aaPredicted RBP12.55□□□□□ -0.4
TRIM41-204ENST00000508930 IGHV5-51A0A0C4DH38 117 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 TCRBV21S2A2A0A5A6 115 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 ADAM10O14672 748 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 PTBP3O95758 552 aaKnown RBP12.55□□□□□ -0.4
TRIM41-204ENST00000508930 NDUFB7P17568 137 aa12.55□□□□□ -0.4
TRIM41-204ENST00000508930 FBLP22087 321 aaKnown RBP12.55□□□□□ -0.4
TRIM41-204ENST00000508930 BLKP51451 505 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms