RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 ATXN7L3Q14CW9 347 aaPredicted RBP10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 RNPS1Q15287 305 aaKnown RBP10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 CEACAM16Q2WEN9 425 aa10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 PLXDC2Q6UX71 529 aa10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 LHFPL1Q86WI0 220 aa10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 EIF4E3Q8N5X7 224 aaKnown RBP10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 OR5AP2Q8NGF4 316 aa10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 SGK3Q96BR1 496 aa10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 CCDC120Q96HB5 630 aa10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 REEP6Q96HR9 211 aa10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 ALKBH3Q96Q83 286 aaPredicted RBP10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 ST6GALNAC5Q9BVH7 336 aa10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 METTL9Q9H1A3 318 aa10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 RGCCQ9H4X1 137 aa10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 C5orf66Q9H5L9 145 aa10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 ZDHHC11Q9H8X9 412 aa10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 RASL12Q9NYN1 266 aa10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 ATPIF1Q9UII2 106 aa10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 C14orf166Q9Y224 244 aaKnown RBP10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 TIMM10BQ9Y5J6 103 aa10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 KCNMB2Q9Y691 235 aa10.05□□□□□ -0.8
PRPF40B-203ENST00000508736 RNF222A6NCQ9 220 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 OR6C6A6NF89 314 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 NKX2-8O15522 239 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 FARS2O95363 451 aaKnown RBP10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 CSTBP04080 98 aaKnown RBP10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 FGF2P09038 288 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 PET100P0DJ07 73 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 TMEM225BP0DP42 221 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 LUMP51884 338 aaPredicted RBP10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 SRSF6Q13247 344 aaKnown RBP10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 SNAI3Q3KNW1 292 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 LHFPL2Q6ZUX7 228 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 C1QL2Q7Z5L3 287 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 GALNT11Q8NCW6 608 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 OR10K1Q8NGX5 313 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 OR13G1Q8NGZ3 307 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 EMG1Q92979 244 aaKnown RBP10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 ARPC5LQ9BPX5 153 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 GP6Q9HCN6 339 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 ZNF701Q9NV72 531 aaPredicted RBP10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 PLEKHJ1Q9NW61 149 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 MBD2Q9UBB5 411 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 EDARQ9UNE0 448 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 NCOR2Q9Y618 2525 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 FIGNL2A6NMB9 653 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 F5H0A9 414 aaPredicted RBP10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 KLK10O43240 276 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 LCATP04180 440 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 SERPINA5P05154 406 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 B4GALT1P15291 398 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 ZNF32P17041 273 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 HTR5AP47898 357 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 SRYQ05066 204 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 RSU1Q15404 277 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 TSPO2Q5TGU0 170 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 ZNF774Q6NX45 483 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 CRIP3Q6Q6R5 217 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 CCDC36Q8IYA8 594 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 BVESQ8NE79 360 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 DCUN1D4Q92564 292 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 Q96M66 194 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 TECTBQ96PL2 329 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 DNTTIP1Q9H147 329 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 GPR173Q9NS66 373 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 OSGIN2Q9Y236 505 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 MEMO1Q9Y316 297 aa10.04□□□□□ -0.8
PRPF40B-203ENST00000508736 CACNA1AO00555 2505 aa10.03□□□□□ -0.8
PRPF40B-203ENST00000508736 TRBV6-7A0A0A0MS04 114 aa10.03□□□□□ -0.8
PRPF40B-203ENST00000508736 RRP8O43159 456 aaKnown RBP10.03□□□□□ -0.8
PRPF40B-203ENST00000508736 HTR3BO95264 441 aa10.03□□□□□ -0.8
PRPF40B-203ENST00000508736 PGAM2P15259 253 aa10.03□□□□□ -0.8
PRPF40B-203ENST00000508736 GABRR1P24046 479 aa10.03□□□□□ -0.8
PRPF40B-203ENST00000508736 RBP2P50120 134 aa10.03□□□□□ -0.8
PRPF40B-203ENST00000508736 PSG4Q00888 419 aa10.03□□□□□ -0.8
PRPF40B-203ENST00000508736 CLEC18BQ6UXF7 455 aa10.03□□□□□ -0.8
PRPF40B-203ENST00000508736 ZNF100Q8IYN0 542 aa10.03□□□□□ -0.8
PRPF40B-203ENST00000508736 FNDC9Q8TBE3 224 aa10.03□□□□□ -0.8
PRPF40B-203ENST00000508736 TMEM230Q96A57 120 aa10.03□□□□□ -0.8
PRPF40B-203ENST00000508736 BORCS8Q96FH0 119 aa10.03□□□□□ -0.8
PRPF40B-203ENST00000508736 LINC00052Q96N35 136 aa10.03□□□□□ -0.8
PRPF40B-203ENST00000508736 OR2H1Q9GZK4 316 aa10.03□□□□□ -0.8
PRPF40B-203ENST00000508736 PCDHB16Q9NRJ7 776 aa10.03□□□□□ -0.8
PRPF40B-203ENST00000508736 GLS2Q9UI32 602 aa10.03□□□□□ -0.8
PRPF40B-203ENST00000508736 SPEF1Q9Y4P9 236 aa10.03□□□□□ -0.8
PRPF40B-203ENST00000508736 CSAG2Q9Y5P2 127 aa10.03□□□□□ -0.8
PRPF40B-203ENST00000508736 TRGV5A0A0B4J1U4 118 aa10.02□□□□□ -0.8
PRPF40B-203ENST00000508736 TEX13DA0A0J9YY54 714 aaPredicted RBP10.02□□□□□ -0.8
PRPF40B-203ENST00000508736 SCO1O75880 301 aa10.02□□□□□ -0.8
PRPF40B-203ENST00000508736 MMP7P09237 267 aaPredicted RBP10.02□□□□□ -0.8
PRPF40B-203ENST00000508736 SNTB1Q13884 538 aaKnown RBP10.02□□□□□ -0.8
PRPF40B-203ENST00000508736 SLC9A3R2Q15599 337 aa10.02□□□□□ -0.8
PRPF40B-203ENST00000508736 DMRTC1Q5HYR2 192 aa10.02□□□□□ -0.8
PRPF40B-203ENST00000508736 NKAPLQ5M9Q1 402 aa10.02□□□□□ -0.8
PRPF40B-203ENST00000508736 AADACL3Q5VUY0 350 aa10.02□□□□□ -0.8
PRPF40B-203ENST00000508736 MOB3CQ70IA8 216 aa10.02□□□□□ -0.8
PRPF40B-203ENST00000508736 SKA3Q8IX90 412 aa10.02□□□□□ -0.8
PRPF40B-203ENST00000508736 TUSC5Q8IXB3 177 aa10.02□□□□□ -0.8
PRPF40B-203ENST00000508736 RTBDNQ9BSG5 229 aaPredicted RBP10.02□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms