RNA–Protein interactions for RNA: ENST00000508321.1

HTT-204, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 386 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-204ENST00000508321 DNAJB11Q9UBS4 358 aa8.61□□□□□ -1.03
HTT-204ENST00000508321 CSMD1Q96PZ7 3565 aa8.61□□□□□ -1.03
HTT-204ENST00000508321 ITPR3Q14573 2671 aa8.61□□□□□ -1.03
HTT-204ENST00000508321 OTOGQ6ZRI0 2925 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 LOC100506127A0A0U1RQW1 187 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 ISPDA4D126 451 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 LYNX1G3V0Z9 82 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.6□□□□□ -1.03
HTT-204ENST00000508321 NOL3O60936 208 aaKnown RBP8.6□□□□□ -1.03
HTT-204ENST00000508321 RHBDL1O75783 438 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 KNG1P01042 644 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 TMEM225BP0DP42 221 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 LYNX1P0DP58 116 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 CD37P11049 281 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 USF1P22415 310 aaPredicted RBP8.6□□□□□ -1.03
HTT-204ENST00000508321 PTGFRP43088 359 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 RIPPLY3P57055 190 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 ERVK11-1P61568 191 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 LOXL1Q08397 574 aaPredicted RBP8.6□□□□□ -1.03
HTT-204ENST00000508321 C11orf91Q3C1V1 193 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 DMRTC1Q5HYR2 192 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 ELP2Q6IA86 826 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 ASCL4Q6XD76 172 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 ACP7Q6ZNF0 438 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 LINC00596Q86U02 117 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 SATL1Q86VE3 508 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 LRRC28Q86X40 367 aaPredicted RBP8.6□□□□□ -1.03
HTT-204ENST00000508321 ANGPTL5Q86XS5 388 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 LYPD6Q86Y78 171 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 ANKRD13BQ86YJ7 626 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 CROCCP3Q8IVE0 287 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 WFDC11Q8NEX6 87 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 OR5D18Q8NGL1 313 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 OR51F2Q8NH61 342 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 TBC1D15Q8TC07 691 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 SPACA5Q96QH8 159 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 GAL3ST1Q99999 423 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 FUNDC2Q9BWH2 189 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 CST11Q9H112 138 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 METTL9Q9H1A3 318 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 OR51E2Q9H255 320 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 PPIL3Q9H2H8 161 aaKnown RBP8.6□□□□□ -1.03
HTT-204ENST00000508321 SEBOXQ9HB31 216 aaPredicted RBP8.6□□□□□ -1.03
HTT-204ENST00000508321 TREM2Q9NZC2 230 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 NLKQ9UBE8 527 aa8.6□□□□□ -1.03
HTT-204ENST00000508321 MRPS28Q9Y2Q9 187 aaKnown RBP8.6□□□□□ -1.03
HTT-204ENST00000508321 CR1P17927 2039 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 A0A096LNT2 108 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 SLC17A2O00624 439 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 AKR7A2O43488 359 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 BPNT1O95861 308 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 PLATP00750 562 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 EGR1P18146 543 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 ADRA2CP18825 462 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 RAB3BP20337 219 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 CD80P33681 288 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 OR3A4PP47883 348 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 NPY4RP50391 375 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 SCAND1P57086 179 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 FGF12P61328 243 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 RSU1Q15404 277 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 DGUOKQ16854 277 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 NHLRC3Q5JS37 347 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 C1orf100Q5SVJ3 147 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 ATPAF1Q5TC12 328 aaPredicted RBP8.59□□□□□ -1.03
HTT-204ENST00000508321 STUMQ69YW2 141 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 AWAT2Q6E213 333 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 CRIP3Q6Q6R5 217 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 SLC36A1Q7Z2H8 476 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 TGIF2LYQ8IUE0 185 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 Q8NFD4 153 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 RAB2BQ8WUD1 216 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 EMG1Q92979 244 aaKnown RBP8.59□□□□□ -1.03
HTT-204ENST00000508321 SLAMF9Q96A28 289 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 RFT1Q96AA3 541 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 ORAI1Q96D31 301 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 MRPS24Q96EL2 167 aaKnown RBP8.59□□□□□ -1.03
HTT-204ENST00000508321 POM121Q96HA1 1249 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 MRI1Q9BV20 369 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 REG4Q9BYZ8 158 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 CNTD2Q9H8S5 307 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 DCAF16Q9NXF7 216 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 MTCH1Q9NZJ7 389 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 KAAG1Q9UBP8 84 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 MIOXQ9UGB7 285 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 GLS2Q9UI32 602 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 ITGB1BP2Q9UKP3 347 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 PCDHB10Q9UN67 800 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 V9GY05 133 aa8.59□□□□□ -1.03
HTT-204ENST00000508321 FLNAP21333 2647 aaKnown RBP8.58□□□□□ -1.04
HTT-204ENST00000508321 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.58□□□□□ -1.048e-7■■■■□ 25.7
HTT-204ENST00000508321 OR2AT4A6NND4 320 aa8.58□□□□□ -1.04
HTT-204ENST00000508321 CEACAM18A8MTB9 384 aa8.58□□□□□ -1.04
HTT-204ENST00000508321 NOTOA8MTQ0 251 aa8.58□□□□□ -1.04
HTT-204ENST00000508321 A8MXK9 166 aa8.58□□□□□ -1.04
HTT-204ENST00000508321 F5H0A9 414 aaPredicted RBP8.58□□□□□ -1.04
HTT-204ENST00000508321 C3orf80F5H4A9 247 aa8.58□□□□□ -1.04
HTT-204ENST00000508321 H3BUI4 141 aa8.58□□□□□ -1.04
HTT-204ENST00000508321 AIPO00170 330 aa8.58□□□□□ -1.04
HTT-204ENST00000508321 SLC22A1O15245 554 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms