RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 ASRGL1Q7L266 308 aa10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 OR51G2Q8NGK0 314 aa10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 RORBQ92753 470 aa10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 CIB1Q99828 191 aa10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 SSX3Q99909 188 aa10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 USE1Q9NZ43 259 aa10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 PLA2G2EQ9NZK7 142 aa10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 H2AFY2Q9P0M6 372 aaPredicted RBP10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 FBLN5Q9UBX5 448 aa10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 POLDIP2Q9Y2S7 368 aa10.58□□□□□ -0.72
HMGCS1-205ENST00000508319 MEGF11A6BM72 1044 aa10.57□□□□□ -0.72
HMGCS1-205ENST00000508319 ANKRD61A6NGH8 418 aa10.57□□□□□ -0.72
HMGCS1-205ENST00000508319 RPP14O95059 124 aaKnown RBP10.57□□□□□ -0.72
HMGCS1-205ENST00000508319 APOL3O95236 402 aa10.57□□□□□ -0.72
HMGCS1-205ENST00000508319 CCL3L1P16619 93 aa10.57□□□□□ -0.72
HMGCS1-205ENST00000508319 SLC35E4Q6ICL7 350 aa10.57□□□□□ -0.72
HMGCS1-205ENST00000508319 CRIP3Q6Q6R5 217 aa10.57□□□□□ -0.72
HMGCS1-205ENST00000508319 AMIGO2Q86SJ2 522 aa10.57□□□□□ -0.72
HMGCS1-205ENST00000508319 CATSPERDQ86XM0 798 aa10.57□□□□□ -0.72
HMGCS1-205ENST00000508319 ANGPTL5Q86XS5 388 aa10.57□□□□□ -0.72
HMGCS1-205ENST00000508319 ZDHHC13Q8IUH4 622 aa10.57□□□□□ -0.72
HMGCS1-205ENST00000508319 OR4M1Q8NGD0 313 aa10.57□□□□□ -0.72
HMGCS1-205ENST00000508319 PPP1R35Q8TAP8 253 aa10.57□□□□□ -0.72
HMGCS1-205ENST00000508319 TRMT10AQ8TBZ6 339 aaKnown RBP10.57□□□□□ -0.72
HMGCS1-205ENST00000508319 UBE2FQ969M7 185 aa10.57□□□□□ -0.72
HMGCS1-205ENST00000508319 TBX5Q99593 518 aa10.57□□□□□ -0.72
HMGCS1-205ENST00000508319 PKIBQ9C010 78 aa10.57□□□□□ -0.72
HMGCS1-205ENST00000508319 MEGF9Q9H1U4 602 aa10.57□□□□□ -0.72
HMGCS1-205ENST00000508319 OR14J1Q9UGF5 321 aa10.57□□□□□ -0.72
HMGCS1-205ENST00000508319 IGKV1-27A0A075B6S5 117 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 A0A1W2PPH5 198 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 A0A1W2PQL4 384 aaPredicted RBP10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 ZNF737O75373 536 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 TK1P04183 234 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 KRT8P05787 483 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 FASP25445 335 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 GABRA5P31644 462 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 POLR2IP36954 125 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 BMXP51813 675 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 EFNB2P52799 333 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 DLX6P56179 175 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 ERVFRD-1P60508 538 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 IL24Q13007 206 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 LY6EQ16553 131 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 AANATQ16613 207 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 ODF4Q2M2E3 257 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 YIPF7Q8N8F6 280 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 OR2T27Q8NH04 317 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 GABARAPL3Q9BY60 117 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 FAM234AQ9H0X4 552 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 HEXA-AS1Q9H8Q6 139 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 PLEKHA1Q9HB21 404 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 WARS2Q9UGM6 360 aaKnown RBP10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 ENOPH1Q9UHY7 261 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 SIGLEC9Q9Y336 463 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 AP4S1Q9Y587 144 aa10.56□□□□□ -0.72
HMGCS1-205ENST00000508319 F8VVB4 439 aa10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 F8VWA3 439 aa10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 H3BSH0 61 aa10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 K7N7A8 449 aa10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 SYT7O43581 403 aa10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 CHST1O43916 411 aa10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 OR2T7P0C7T2 308 aa10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 PIPP12273 146 aaPredicted RBP10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 COX7A1P24310 79 aa10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 HTR1FP30939 366 aa10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 COL10A1Q03692 680 aa10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 UBE2V2Q15819 145 aa10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 C2orf68Q2NKX9 166 aa10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 ZNF782Q6ZMW2 699 aaPredicted RBP10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 OR10H4Q8NGA5 316 aa10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 PIFOQ8TCI5 191 aa10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 CHST5Q9GZS9 411 aa10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 MTCH1Q9NZJ7 389 aa10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 OAZ3Q9UMX2 235 aa10.55□□□□□ -0.72
HMGCS1-205ENST00000508319 hCG_1809904A0A1W2PP81 198 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 A0A1W2PPE2 198 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 FAM230AA0A1W2PPH8 454 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 A0A1W2PR64 198 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 A0A1W2PRV1 198 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 METTL15A6NJ78 407 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 FAM90A8PA6NJQ4 464 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 C17orf98A8MV24 154 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 ODF3BA8MYP8 253 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 SULT1C4O75897 302 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 FCGR1AP12314 374 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 ISL1P61371 349 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 C1orf146Q5VVC0 180 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 TCF23Q7RTU1 214 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 LHFPL4Q7Z7J7 247 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 PRSS35Q8N3Z0 413 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 ASCC1Q8N9N2 400 aaKnown RBP10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 OR4C13Q8NGP0 309 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 SLAMF9Q96A28 289 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 CEP19Q96LK0 163 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 RIBC2Q9H4K1 309 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 RANBP3Q9H6Z4 567 aaPredicted RBP10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 RAB18Q9NP72 206 aa10.54□□□□□ -0.72
HMGCS1-205ENST00000508319 LOC107986453A0A1B0GWG9 222 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms