RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 GATCO43716 136 aaKnown RBP1.71□□□□□ -2.14
LSM6-205ENST00000507449 CD8AP01732 235 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 IGLV7-43P04211 117 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 OR4Q2P0C623 313 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 OR5AC1P0C628 307 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 PSMB2P49721 201 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 RGS6P49758 472 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 RPL10AP62906 217 aaKnown RBP1.71□□□□□ -2.14
LSM6-205ENST00000507449 ATP5G2Q06055 141 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 MAPRE2Q15555 327 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 KCTD16Q68DU8 428 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 NELFCDQ8IXH7 590 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 ATPAF2Q8N5M1 289 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 ZNF555Q8NEP9 628 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 CIDECQ96AQ7 238 aaPredicted RBP1.71□□□□□ -2.14
LSM6-205ENST00000507449 YIPF6Q96EC8 236 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 SEC22CQ9BRL7 303 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 BEX2Q9BXY8 128 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 SYT4Q9H2B2 425 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 SLC38A1Q9H2H9 487 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 RDH14Q9HBH5 336 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 FAM60AQ9NP50 221 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 ACOT13Q9NPJ3 140 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 TMEM38BQ9NVV0 291 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 STX18Q9P2W9 335 aaKnown RBP1.71□□□□□ -2.14
LSM6-205ENST00000507449 PRO0628Q9UI54 55 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 RAB23Q9ULC3 237 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 AP3M1Q9Y2T2 418 aa1.71□□□□□ -2.14
LSM6-205ENST00000507449 RBMX2Q9Y388 322 aaKnown RBP1.71□□□□□ -2.14
LSM6-205ENST00000507449 NPHP4O75161 1426 aaPredicted RBP1.71□□□□□ -2.14
LSM6-205ENST00000507449 ZNF593O00488 134 aaPredicted RBP1.7□□□□□ -2.14
LSM6-205ENST00000507449 PFN1P07737 140 aaKnown RBP1.7□□□□□ -2.14
LSM6-205ENST00000507449 INAFM2P0DMQ5 153 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 BGNP21810 368 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 OR12D2P58182 307 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 RPS11P62280 158 aaKnown RBP eCLIP1.7□□□□□ -2.14
LSM6-205ENST00000507449 GUSBP1Q15486 140 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 TNXAQ16473 311 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 CEACAM16Q2WEN9 425 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 ACTL10Q5JWF8 245 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 CLLU1OSQ5K130 101 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 SYT6Q5T7P8 510 aaPredicted RBP1.7□□□□□ -2.14
LSM6-205ENST00000507449 THOC7Q6I9Y2 204 aaKnown RBP1.7□□□□□ -2.14
LSM6-205ENST00000507449 FAHD1Q6P587 224 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 FA2HQ7L5A8 372 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 SGPP2Q8IWX5 399 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 CYP4Z2PQ8N1L4 340 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 OR4D6Q8NGJ1 314 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 OR6N2Q8NGY6 317 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 PHF10Q8WUB8 498 aaKnown RBP1.7□□□□□ -2.14
LSM6-205ENST00000507449 ITLN2Q8WWU7 325 aaPredicted RBP1.7□□□□□ -2.14
LSM6-205ENST00000507449 SMIM8Q96KF7 97 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 METTL26Q96S19 204 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 SHANK2-AS3Q9BTD1 123 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 C1orf50Q9BV19 199 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 HINT2Q9BX68 163 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 MRPL20Q9BYC9 149 aaKnown RBP1.7□□□□□ -2.14
LSM6-205ENST00000507449 PRRG3Q9BZD7 231 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.7□□□□□ -2.14
LSM6-205ENST00000507449 PRORYQ9H606 182 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 C12orf4Q9NQ89 552 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 RMND1Q9NWS8 449 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 ANXA10Q9UJ72 324 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 MUC19Q7Z5P9 8384 aa1.7□□□□□ -2.14
LSM6-205ENST00000507449 KIAA1671Q9BY89 1806 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 NDUFS8O00217 210 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 ARR3P36575 388 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 NUP62P37198 522 aaPredicted RBP1.69□□□□□ -2.14
LSM6-205ENST00000507449 GPR4P46093 362 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 C2orf80Q0P641 193 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 ZNF404Q494X3 552 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 FAM231DQ6ZW35 169 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 TRMT10CQ7L0Y3 403 aaKnown RBP1.69□□□□□ -2.14
LSM6-205ENST00000507449 NT5DC3Q86UY8 548 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 PDCL2Q8N4E4 241 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 CCNYL1Q8N7R7 359 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 ZDHHC22Q8N966 263 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 ZNF680Q8NEM1 530 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 FXYD5Q96DB9 178 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 CPB2Q96IY4 423 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 RILPQ96NA2 401 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 QKIQ96PU8 341 aaKnown RBP eCLIP1.69□□□□□ -2.14
LSM6-205ENST00000507449 PEBP4Q96S96 227 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 ZNF302Q9NR11 478 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 SDHAF2Q9NX18 166 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 RBM12B-AS1Q9P1G2 102 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 ZNF492Q9P255 531 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 ZNF229Q9UJW7 825 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 NID2Q14112 1375 aa1.69□□□□□ -2.14
LSM6-205ENST00000507449 SCN4AP35499 1836 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 KIR2DS1A0A191URI9 304 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 A0A1W2PNN7 141 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 OR2AT4A6NND4 320 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 ZMPSTE24O75844 475 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 OR2A4O95047 310 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 KCNK2O95069 426 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 NRASP01111 189 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 HRASP01112 189 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 KRASP01116 189 aa1.68□□□□□ -2.14
LSM6-205ENST00000507449 RLN2P04090 185 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms