RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 GPR173Q9NS66 373 aa11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 FBLN5Q9UBX5 448 aa11.79□□□□□ -0.52
HMGCS1-203ENST00000507004 SNTNA6NMZ2 147 aa11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 ANGPTL7O43827 346 aa11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 MITFO75030 526 aaPredicted RBP11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 CHRM2P08172 466 aa11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 RPSAP08865 295 aaKnown RBP11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 UBCP0CG48 685 aaKnown RBP11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 ACTC1P68032 377 aa11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 ACTA1P68133 377 aa11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 KLRD1Q13241 179 aa11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 CNN3Q15417 329 aaKnown RBP11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 LRRC75BQ2VPJ9 315 aa11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 ASRGL1Q7L266 308 aa11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 KCTD20Q7Z5Y7 419 aa11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 C10orf67Q8IYJ2 551 aa11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 ENTHD1Q8IYW4 607 aa11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 PP6455Q8WZ26 134 aa11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 TAF15Q92804 592 aaKnown RBP eCLIP11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 UBE2FQ969M7 185 aa11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 CIB1Q99828 191 aa11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 CDCA4Q9BXL8 241 aa11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 TTTY10Q9BZA0 68 aa11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 ORC6Q9Y5N6 252 aa11.78□□□□□ -0.52
HMGCS1-203ENST00000507004 SYNGR1O43759 233 aa11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 CYB5AP00167 134 aa11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 TK1P04183 234 aa11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 ERVK11-1P61568 191 aa11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 BCDIN3DQ7Z5W3 292 aaKnown RBP11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 CATSPERDQ86XM0 798 aa11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 EGFL6Q8IUX8 553 aa11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 CD177Q8N6Q3 437 aa11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 DNAAF1Q8NEP3 725 aa11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 OR10H4Q8NGA5 316 aa11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 OR4C13Q8NGP0 309 aa11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 PPP1R35Q8TAP8 253 aa11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 PPP1R14AQ96A00 147 aa11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 FOXRED1Q96CU9 486 aaPredicted RBP11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 BORCS8Q96FH0 119 aa11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 MRPL48Q96GC5 212 aaKnown RBP11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 SSX3Q99909 188 aa11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 CHST5Q9GZS9 411 aa11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 NEK6Q9HC98 313 aa11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 C19orf12Q9NSK7 152 aa11.77□□□□□ -0.53
HMGCS1-203ENST00000507004 A0A1W2PQL4 384 aaPredicted RBP11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 A0A1W2PRD5 423 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 A0A1W2PRF3 423 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 A0A1W2PRM7 423 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 H3BUI4 141 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 H3BUX3 64 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 K7N7A8 449 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 RPP14O95059 124 aaKnown RBP11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 EPHA2P29317 976 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 GABRA5P31644 462 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 KIR2DS4P43632 304 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 MEF2CQ06413 473 aaPredicted RBP11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 C2orf68Q2NKX9 166 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 TMEM244Q5VVB8 128 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 MEDAGQ5VYS4 303 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 TMEM200BQ69YZ2 307 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 AMIGO2Q86SJ2 522 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 OR13D1Q8NGV5 346 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 CEP19Q96LK0 163 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 NPFFR1Q9GZQ6 430 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 SEMA6AQ9H2E6 1030 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 ELL3Q9HB65 397 aaPredicted RBP11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 IMPAD1Q9NX62 359 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 OR14J1Q9UGF5 321 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 GLS2Q9UI32 602 aa11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 TBL2Q9Y4P3 447 aaKnown RBP11.76□□□□□ -0.53
HMGCS1-203ENST00000507004 WNK1Q9H4A3 2382 aa11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 FAM230AA0A1W2PPH8 454 aa11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 PRKACBP22694 351 aa11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 ATP1B3P54709 279 aa11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 SLC25A30Q5SVS4 291 aa11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 ASPHD2Q6ICH7 369 aa11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 HCP5Q6MZN7 132 aa11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 Q6ZTK2 550 aa11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 GDPD3Q7L5L3 318 aa11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 MKXQ8IYA7 352 aa11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 ASCC1Q8N9N2 400 aaKnown RBP11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 OR2T6Q8NHC8 308 aa11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 RORBQ92753 470 aa11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 SNX22Q96L94 193 aa11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 ZNF488Q96MN9 340 aa11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 TBX5Q99593 518 aa11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 PPA2Q9H2U2 334 aa11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 RIBC2Q9H4K1 309 aa11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 PITPNC1Q9UKF7 332 aa11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 OAZ3Q9UMX2 235 aa11.75□□□□□ -0.53
HMGCS1-203ENST00000507004 hADV38S2A0JD32 116 aa11.74□□□□□ -0.53
HMGCS1-203ENST00000507004 C17orf98A8MV24 154 aa11.74□□□□□ -0.53
HMGCS1-203ENST00000507004 VGLL3A8MV65 326 aa11.74□□□□□ -0.53
HMGCS1-203ENST00000507004 M0R129 80 aa11.74□□□□□ -0.53
HMGCS1-203ENST00000507004 MAGEB4O15481 346 aaPredicted RBP11.74□□□□□ -0.53
HMGCS1-203ENST00000507004 TFF1P04155 84 aa11.74□□□□□ -0.53
HMGCS1-203ENST00000507004 RBP2P50120 134 aa11.74□□□□□ -0.53
HMGCS1-203ENST00000507004 DEFA6Q01524 100 aa11.74□□□□□ -0.53
HMGCS1-203ENST00000507004 PDLIM3Q53GG5 364 aaPredicted RBP11.74□□□□□ -0.53
HMGCS1-203ENST00000507004 DMRTC1Q5HYR2 192 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms