RNA–Protein interactions for RNA: ENST00000506941.1

NPHP4-210, Transcript of nephrocystin 4, humanhuman

TSL 4

Gene NPHP4, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-210ENST00000506941 CCDC90BQ9GZT6 254 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 RASSF4Q9H2L5 321 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 HES4Q9HCC6 221 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 TAS2R4Q9NYW5 299 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 MTCH1Q9NZJ7 389 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 NLKQ9UBE8 527 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 KAAG1Q9UBP8 84 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 BLOC1S6Q9UL45 172 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 POLDIP2Q9Y2S7 368 aa15.12■□□□□ 0.01
NPHP4-210ENST00000506941 IGKV1D-17A0A075B6S4 117 aa15.11■□□□□ 0.01
NPHP4-210ENST00000506941 OR2AT4A6NND4 320 aa15.11■□□□□ 0.01
NPHP4-210ENST00000506941 TMPRSS2O15393 492 aa15.11■□□□□ 0.01
NPHP4-210ENST00000506941 ALX3O95076 343 aa15.11■□□□□ 0.01
NPHP4-210ENST00000506941 CD1AP06126 327 aa15.11■□□□□ 0.01
NPHP4-210ENST00000506941 ACAA1P09110 424 aaPredicted RBP15.11■□□□□ 0.01
NPHP4-210ENST00000506941 SELLP14151 372 aa15.11■□□□□ 0.01
NPHP4-210ENST00000506941 ATP1B3P54709 279 aa15.11■□□□□ 0.01
NPHP4-210ENST00000506941 MTCP1P56278 107 aa15.11■□□□□ 0.01
NPHP4-210ENST00000506941 MED22Q15528 200 aa15.11■□□□□ 0.01
NPHP4-210ENST00000506941 ATPAF1Q5TC12 328 aaPredicted RBP15.11■□□□□ 0.01
NPHP4-210ENST00000506941 SLC25A26Q70HW3 274 aa15.11■□□□□ 0.01
NPHP4-210ENST00000506941 SLAMF9Q96A28 289 aa15.11■□□□□ 0.01
NPHP4-210ENST00000506941 DACT3Q96B18 629 aaPredicted RBP15.11■□□□□ 0.01
NPHP4-210ENST00000506941 TMIGD2Q96BF3 282 aa15.11■□□□□ 0.01
NPHP4-210ENST00000506941 OR14A2Q96R54 314 aa15.11■□□□□ 0.01
NPHP4-210ENST00000506941 RASL12Q9NYN1 266 aa15.11■□□□□ 0.01
NPHP4-210ENST00000506941 CLN8Q9UBY8 286 aa15.11■□□□□ 0.01
NPHP4-210ENST00000506941 ZNF222Q9UK12 451 aa15.11■□□□□ 0.01
NPHP4-210ENST00000506941 PPIAL4CA0A0B4J2A2 164 aa15.1■□□□□ 0.01
NPHP4-210ENST00000506941 A0A0G2JMP0 313 aa15.1■□□□□ 0.01
NPHP4-210ENST00000506941 A0A0X1KG70 313 aa15.1■□□□□ 0.01
NPHP4-210ENST00000506941 SPRY1O43609 319 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-210ENST00000506941 INMTO95050 263 aa15.1■□□□□ 0.01
NPHP4-210ENST00000506941 NXPH2O95156 264 aa15.1■□□□□ 0.01
NPHP4-210ENST00000506941 AVPP01185 164 aa15.1■□□□□ 0.01
NPHP4-210ENST00000506941 CD2P06729 351 aa15.1■□□□□ 0.01
NPHP4-210ENST00000506941 PSG2P11465 335 aa15.1■□□□□ 0.01
NPHP4-210ENST00000506941 EEF1B2P24534 225 aaKnown RBP15.1■□□□□ 0.01
NPHP4-210ENST00000506941 POU3F4P49335 361 aa15.1■□□□□ 0.01
NPHP4-210ENST00000506941 GABARAPL2P60520 117 aa15.1■□□□□ 0.01
NPHP4-210ENST00000506941 SMIM21Q3B7S5 101 aa15.1■□□□□ 0.01
NPHP4-210ENST00000506941 Q499Y3 187 aa15.1■□□□□ 0.01
NPHP4-210ENST00000506941 DCAF12L2Q5VW00 463 aa15.1■□□□□ 0.01
NPHP4-210ENST00000506941 FAHD2BQ6P2I3 314 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-210ENST00000506941 ZNF788Q6ZQV5 615 aa15.1■□□□□ 0.01
NPHP4-210ENST00000506941 C1orf229Q6ZS94 237 aaPredicted RBP15.1■□□□□ 0.01
NPHP4-210ENST00000506941 OR4M2Q8NGB6 313 aa15.1■□□□□ 0.01
NPHP4-210ENST00000506941 FAHD2AQ96GK7 314 aa15.1■□□□□ 0.01
NPHP4-210ENST00000506941 GAFA1Q96PS6 74 aa15.1■□□□□ 0.01
NPHP4-210ENST00000506941 TMPRSS13Q9BYE2 586 aa15.1■□□□□ 0.01
NPHP4-210ENST00000506941 TRBV5-7A0A0A0MS05 114 aa15.09■□□□□ 0.01
NPHP4-210ENST00000506941 C22orf46C9J442 243 aa15.09■□□□□ 0.01
NPHP4-210ENST00000506941 DVL1O14640 695 aa15.09■□□□□ 0.01
NPHP4-210ENST00000506941 HCKP08631 526 aa15.09■□□□□ 0.01
NPHP4-210ENST00000506941 OCMP0CE72 109 aaPredicted RBP15.09■□□□□ 0.01
NPHP4-210ENST00000506941 RAB3AP20336 220 aa15.09■□□□□ 0.01
NPHP4-210ENST00000506941 NPY4RP50391 375 aa15.09■□□□□ 0.01
NPHP4-210ENST00000506941 PDZK1IP1Q13113 114 aa15.09■□□□□ 0.01
NPHP4-210ENST00000506941 OR5D18Q8NGL1 313 aa15.09■□□□□ 0.01
NPHP4-210ENST00000506941 CEP19Q96LK0 163 aa15.09■□□□□ 0.01
NPHP4-210ENST00000506941 SHARPINQ9H0F6 387 aa15.09■□□□□ 0.01
NPHP4-210ENST00000506941 DNTTIP1Q9H147 329 aa15.09■□□□□ 0.01
NPHP4-210ENST00000506941 OR5V1Q9UGF6 321 aa15.09■□□□□ 0.01
NPHP4-210ENST00000506941 CDC42EP3Q9UKI2 254 aa15.09■□□□□ 0.01
NPHP4-210ENST00000506941 JMJD1CQ15652 2540 aa15.09■□□□□ 0.01
NPHP4-210ENST00000506941 TRAV8-7A0A075B6U6 113 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 IGHV2-70DA0A0C4DH43 119 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 IGKV1-12A0A0C4DH73 117 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 ZNF879B4DU55 563 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 IGKV1D-12P01611 117 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 IGFBP3P17936 291 aaPredicted RBP15.08■□□□□ 0
NPHP4-210ENST00000506941 BCL3P20749 454 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 PCMT1P22061 227 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 NPBWR2P48146 333 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 CEBPDP49716 269 aaPredicted RBP15.08■□□□□ 0
NPHP4-210ENST00000506941 ZP1P60852 638 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 IKZF1Q13422 519 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 INSL4Q14641 139 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 KISS1Q15726 138 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 TBCEQ15813 527 aaPredicted RBP15.08■□□□□ 0
NPHP4-210ENST00000506941 CHRFAM7AQ494W8 412 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 LIPKQ5VXJ0 399 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 SLC36A1Q7Z2H8 476 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 CD177Q8N6Q3 437 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 OR52N4Q8NGI2 321 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 DERL3Q96Q80 235 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 NKX3-1Q99801 234 aaPredicted RBP15.08■□□□□ 0
NPHP4-210ENST00000506941 BEX2Q9BXY8 128 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 OPN4Q9UHM6 478 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 INSIG2Q9Y5U4 225 aa15.08■□□□□ 0
NPHP4-210ENST00000506941 LOC105371242A0A075B767 164 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 A0A1W2PPK0 400 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 MAGEA13PA6NCF6 341 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 NKX6-3A6NJ46 265 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 RFPL4AA6NLU0 287 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 RFPL4AL1F8VTS6 287 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 SIGLEC5O15389 551 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 PIN1P1O15428 100 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 ANGPTL7O43827 346 aa15.07■□□□□ 0
NPHP4-210ENST00000506941 HSMCR30P0CW71 290 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms