RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 SYT7O43581 403 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 SPRY1O43609 319 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 IGHV4-59P01825 116 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 UBCP0CG48 685 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 OMGP23515 440 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 PRDX2P32119 198 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 ATP6V1E1P36543 226 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 CEBPDP49716 269 aaPredicted RBP7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 UBE2E1P51965 193 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 RAG2P55895 527 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 ODF4Q2M2E3 257 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 TP53I3Q53FA7 332 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 PRR31Q5SQ13 230 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 MEDAGQ5VYS4 303 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 KCTD20Q7Z5Y7 419 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 ANGPTL5Q86XS5 388 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 CBR4Q8N4T8 237 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 ZNF561Q8N587 486 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 C11orf42Q8N5U0 333 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 OR2G2Q8NGZ5 317 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 ZNF696Q9H7X3 374 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 C19orf12Q9NSK7 152 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 GNG8Q9UK08 70 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 EXOGQ9Y2C4 368 aaKnown RBP7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 TRRAPQ9Y4A5 3859 aa7.42□□□□□ -1.22
PDLIM5-209ENST00000506632 IGKV1-9A0A0C4DH69 117 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 A0A1W2PQ09 198 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 F8VVB4 439 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 F8VWA3 439 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 SLC1A7O00341 560 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 SLC16A6O15403 523 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 GPR137BO60478 399 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 ZNF737O75373 536 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 GATBO75879 557 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 NXPH2O95156 264 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 KNG1P01042 644 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 ISG15P05161 165 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 FBP1P09467 338 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 EEF1B2P24534 225 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 SAA4P35542 130 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 CCR9P51686 369 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 FUT6P51993 359 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 OR12D2P58182 307 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 NANOS3P60323 173 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 ACTC1P68032 377 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 ACTA1P68133 377 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 ACSM1Q08AH1 577 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 TAF9Q16594 264 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 ZIK1Q3SY52 487 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 NCR3LG1Q68D85 454 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 FAM220AQ7Z4H9 259 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 RDH10Q8IZV5 341 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 PNKDQ8N490 385 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 DNAAF1Q8NEP3 725 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 OR5D13Q8NGL4 314 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 OR4F5Q8NH21 305 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 RHOXF1Q8NHV9 184 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 TRMT10AQ8TBZ6 339 aaKnown RBP7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 WFDC12Q8WWY7 111 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 PP6455Q8WZ26 134 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 LGALS12Q96DT0 336 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 RNFT2Q96EX2 444 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 AJUBAQ96IF1 538 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 RHOVQ96L33 236 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 SLC29A1Q99808 456 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 ZNF649Q9BS31 505 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 C9orf16Q9BUW7 83 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 FAM234AQ9H0X4 552 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 DPAGT1Q9H3H5 408 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 PLEKHA1Q9HB21 404 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 SEBOXQ9HB31 216 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 BEX1Q9HBH7 125 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 TNFRSF19Q9NS68 423 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 MTCH1Q9NZJ7 389 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 FRRS1LQ9P0K9 344 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 SLC7A11Q9UPY5 501 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 CAB39Q9Y376 341 aaPredicted RBP7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 FAM96BQ9Y3D0 163 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 ORC6Q9Y5N6 252 aa7.41□□□□□ -1.22
PDLIM5-209ENST00000506632 DSCAML1Q8TD84 2053 aa7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 TMEM238LA0A1B0GVL6 79 aa7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 FAM230AA0A1W2PPH8 454 aa7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 DAPL1A0PJW8 107 aa7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 CLPSL1A2RUU4 121 aa7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 OR4C45A6NMZ5 311 aa7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 H3BSH0 61 aa7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 K7N7A8 449 aa7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 PF4P02776 101 aa7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 TK1P04183 234 aa7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 CRYBA1P05813 215 aa7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 CAPZA1P52907 286 aa7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 DLX6P56179 175 aa7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 RPL31P62899 125 aaKnown RBP7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 ZNF91Q05481 1191 aa7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 BLMHQ13867 455 aa7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 ZNF273Q14593 569 aa7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 MIDNQ504T8 468 aa7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 ARSJQ5FYB0 599 aaPredicted RBP7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 LCE2DQ5TA82 110 aaPredicted RBP7.4□□□□□ -1.22
PDLIM5-209ENST00000506632 TMEM244Q5VVB8 128 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms