RNA–Protein interactions for RNA: ENST00000506368.5

SCLT1-208, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 2,096 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-208ENST00000506368 HCRTR1O43613 425 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 MPZL1O95297 269 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 OPN1MWP04001 364 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 HCKP08631 526 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 OPN1MW2P0DN77 364 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 OPN1MW3P0DN78 364 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 PVRP15151 417 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 CSNK1A1P48729 337 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 ZNF133P52736 654 aaPredicted RBP13.95□□□□□ -0.18
SCLT1-208ENST00000506368 TLE4Q04727 773 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 RUNX3Q13761 415 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 TMEM187Q14656 261 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 USF2Q15853 346 aaPredicted RBP13.95□□□□□ -0.18
SCLT1-208ENST00000506368 PRTGQ2VWP7 1150 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 DOK3Q7L591 496 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 MRPL52Q86TS9 123 aaKnown RBP13.95□□□□□ -0.18
SCLT1-208ENST00000506368 TGIF2LXQ8IUE1 241 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 LINC00346Q8IVM7 164 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 SFTPA1Q8IWL2 248 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 LGI3Q8N145 548 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 DAZLQ92904 295 aaKnown RBP13.95□□□□□ -0.18
SCLT1-208ENST00000506368 GPER1Q99527 375 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 ZNF2Q9BSG1 426 aaPredicted RBP13.95□□□□□ -0.18
SCLT1-208ENST00000506368 PECRQ9BY49 303 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 TBL1XR1Q9BZK7 514 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 FOXD3Q9UJU5 478 aaPredicted RBP13.95□□□□□ -0.18
SCLT1-208ENST00000506368 NPIPA1Q9UND3 350 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 DFFBO76075 338 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 OR3A4PP47883 348 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 ACY1Q03154 408 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 TAF9Q16594 264 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 COA6Q5JTJ3 125 aaKnown RBP13.95□□□□□ -0.18
SCLT1-208ENST00000506368 ZNF385CQ66K41 422 aaPredicted RBP13.95□□□□□ -0.18
SCLT1-208ENST00000506368 FBXW12Q6X9E4 464 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 OR2G3Q8NGZ4 309 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 ABHD5Q8WTS1 349 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 FRZBQ92765 325 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 C18orf12Q96KH6 178 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 SH3BGRL3Q9H299 93 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 PRO1933Q9H354 126 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 HRASLS2Q9NWW9 162 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 CYP8B1Q9UNU6 501 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 CBY1Q9Y3M2 126 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 HS3ST3B1Q9Y662 390 aa13.95□□□□□ -0.18
SCLT1-208ENST00000506368 CACNA1IQ9P0X4 2223 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 LOC101059948A0A1B0GTJ6 334 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 ZNF732B4DXR9 585 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 C1QL1O75973 258 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 CYB5R3P00387 301 aaPredicted RBP13.94□□□□□ -0.18
SCLT1-208ENST00000506368 SRPXP78539 464 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 OR8G1Q15617 311 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 ZNF343Q6P1L6 599 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 LIAT1Q6ZQX7 453 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 SLC16A14Q7RTX9 510 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 GALNTL5Q7Z4T8 443 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 AVL9Q8NBF6 648 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 OR14C36Q8NHC7 312 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 ZNF524Q96C55 264 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 BANF2Q9H503 90 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 AK3Q9UIJ7 227 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 TRAV1-1A0A0B4J248 108 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 HPNP05981 417 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 CEACAM1P13688 526 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 GJA4P35212 333 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 NOVA1P51513 510 aaKnown RBP13.94□□□□□ -0.18
SCLT1-208ENST00000506368 SLC37A1P57057 533 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 EWSR1Q01844 656 aaKnown RBP eCLIP13.94□□□□□ -0.18
SCLT1-208ENST00000506368 ICAM4Q14773 271 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 SLC10A1Q14973 349 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 R3HDM4Q96D70 268 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 BOD1Q96IK1 185 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 SOX7Q9BT81 388 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 CDH20Q9HBT6 801 aa13.94□□□□□ -0.18
SCLT1-208ENST00000506368 CDS2O95674 445 aa13.93□□□□□ -0.18
SCLT1-208ENST00000506368 SRFP11831 508 aa13.93□□□□□ -0.18
SCLT1-208ENST00000506368 IL12BP29460 328 aa13.93□□□□□ -0.18
SCLT1-208ENST00000506368 BLVRBP30043 206 aaPredicted RBP13.93□□□□□ -0.18
SCLT1-208ENST00000506368 PIGPP57054 158 aa13.93□□□□□ -0.18
SCLT1-208ENST00000506368 ERV3-1Q14264 604 aa13.93□□□□□ -0.18
SCLT1-208ENST00000506368 FZD2Q14332 565 aa13.93□□□□□ -0.18
SCLT1-208ENST00000506368 ABCA11PQ4W5N1 156 aa13.93□□□□□ -0.18
SCLT1-208ENST00000506368 C2orf27AQ580R0 203 aa13.93□□□□□ -0.18
SCLT1-208ENST00000506368 GFI1BQ5VTD9 330 aa13.93□□□□□ -0.18
SCLT1-208ENST00000506368 RTN4RL2Q86UN3 420 aa13.93□□□□□ -0.18
SCLT1-208ENST00000506368 FBXL14Q8N1E6 418 aa13.93□□□□□ -0.18
SCLT1-208ENST00000506368 MVB12AQ96EY5 273 aa13.93□□□□□ -0.18
SCLT1-208ENST00000506368 GPR87Q9BY21 358 aa13.93□□□□□ -0.18
SCLT1-208ENST00000506368 NXF5Q9H1B4 397 aaKnown RBP13.93□□□□□ -0.18
SCLT1-208ENST00000506368 USP34Q70CQ2 3546 aa13.93□□□□□ -0.18
SCLT1-208ENST00000506368 SHISA7A6NL88 538 aa13.92□□□□□ -0.18
SCLT1-208ENST00000506368 C17orf105B2RV13 164 aa13.92□□□□□ -0.18
SCLT1-208ENST00000506368 H0YL77 283 aa13.92□□□□□ -0.18
SCLT1-208ENST00000506368 PHOX2AO14813 284 aa13.92□□□□□ -0.18
SCLT1-208ENST00000506368 NUDT14O95848 222 aa13.92□□□□□ -0.18
SCLT1-208ENST00000506368 GZMBP10144 247 aa13.92□□□□□ -0.18
SCLT1-208ENST00000506368 MMP9P14780 707 aa13.92□□□□□ -0.18
SCLT1-208ENST00000506368 ATP6V0CP27449 155 aa13.92□□□□□ -0.18
SCLT1-208ENST00000506368 OR2C3Q8N628 320 aa13.92□□□□□ -0.18
SCLT1-208ENST00000506368 OR51E1Q8TCB6 317 aa13.92□□□□□ -0.18
SCLT1-208ENST00000506368 BSCL2Q96G97 398 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms