RNA–Protein interactions for RNA: ENST00000504974.1

RFC1-209, Transcript of replication factor C subunit 1, humanhuman

TSL 5

Gene RFC1, Length 495 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-209ENST00000504974 NAB1Q13506 487 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 GK3PQ14409 553 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 NCF4Q15080 339 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 SGCAQ16586 387 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 GUCA2BQ16661 112 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 DGUOKQ16854 277 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 WHAMMP3Q1A5X7 153 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 DEFB110Q30KQ9 67 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 DUPD1Q68J44 220 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 C8orf74Q6P047 294 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 RAB43Q86YS6 212 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 TTC29Q8NA56 475 aaPredicted RBP2.05□□□□□ -2.08
RFC1-209ENST00000504974 FBXO36Q8NEA4 188 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 DUSP18Q8NEJ0 188 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 OR2L3Q8NG85 312 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 OR2G3Q8NGZ4 309 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 SRSF12Q8WXF0 261 aaKnown RBP2.05□□□□□ -2.08
RFC1-209ENST00000504974 STMN2Q93045 179 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 RERGQ96A58 199 aaPredicted RBP2.05□□□□□ -2.08
RFC1-209ENST00000504974 STARD4Q96DR4 205 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 FAM210BQ96KR6 192 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 GPR21Q99679 349 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 SELENOSQ9BQE4 189 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 TMEM59Q9BXS4 323 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 PCBD2Q9H0N5 130 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 DNTTIP1Q9H147 329 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 VCXQ9H320 206 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 ANKRD19PQ9H560 264 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 POPDC3Q9HBV1 291 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 FAM60AQ9NP50 221 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 MRPS30Q9NP92 439 aaKnown RBP2.05□□□□□ -2.08
RFC1-209ENST00000504974 EXD2Q9NVH0 621 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 EURLQ9NYK6 297 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 STOX2Q9P2F5 926 aaPredicted RBP2.05□□□□□ -2.08
RFC1-209ENST00000504974 TAC3Q9UHF0 121 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 ZNF639Q9UID6 485 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 NXT1Q9UKK6 140 aaKnown RBP2.05□□□□□ -2.08
RFC1-209ENST00000504974 FARSAQ9Y285 508 aaKnown RBP2.05□□□□□ -2.08
RFC1-209ENST00000504974 SNX24Q9Y343 169 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 PEX16Q9Y5Y5 336 aa2.05□□□□□ -2.08
RFC1-209ENST00000504974 MRPS18BQ9Y676 258 aaKnown RBP2.05□□□□□ -2.08
RFC1-209ENST00000504974 IGKV1-8A0A0C4DH67 115 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 IGHV3-64DA0A0J9YX35 117 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 FAM240BA0A1B0GVZ2 78 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 PRSS37A4D1T9 235 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 CTAGE15A4D2H0 777 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 ARGFXA6NJG6 315 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 FAM159BA6NKW6 160 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 H0YGG7 62 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 CCL21O00585 134 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 TXNDC9O14530 226 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 XKRYO14609 159 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 SLC31A2O15432 143 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 ABCA1O95477 2261 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 SERPIND1P05546 499 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 ANXA5P08758 320 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 SLC35G6P0C7Q6 338 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 PHBP35232 272 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 TAGLN2P37802 199 aaKnown RBP2.04□□□□□ -2.08
RFC1-209ENST00000504974 GPR6P46095 362 aaPredicted RBP2.04□□□□□ -2.08
RFC1-209ENST00000504974 CRISP3P54108 245 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 PLTPP55058 493 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 FGF8P55075 233 aaPredicted RBP2.04□□□□□ -2.08
RFC1-209ENST00000504974 VSX2P58304 361 aaPredicted RBP2.04□□□□□ -2.08
RFC1-209ENST00000504974 GPX6P59796 221 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 ATP6V0D1P61421 351 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 RPS15AP62244 130 aaKnown RBP2.04□□□□□ -2.08
RFC1-209ENST00000504974 DCDP81605 110 aaKnown RBP2.04□□□□□ -2.08
RFC1-209ENST00000504974 MRPS25P82663 173 aaKnown RBP2.04□□□□□ -2.08
RFC1-209ENST00000504974 REEP5Q00765 189 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 RELAQ04206 551 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 PRDX1Q06830 199 aaKnown RBP2.04□□□□□ -2.08
RFC1-209ENST00000504974 ART3Q13508 389 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 AQP6Q13520 282 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 DDX39BQ13838 428 aaKnown RBP2.04□□□□□ -2.08
RFC1-209ENST00000504974 PTGES3Q15185 160 aaKnown RBP2.04□□□□□ -2.08
RFC1-209ENST00000504974 TGFBIQ15582 683 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 TMEM183BQ1AE95 376 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 CCSMST1Q4G0I0 132 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 NKAIN1Q4KMZ8 207 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 C6orf226Q5I0X4 101 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 COA6Q5JTJ3 125 aaKnown RBP2.04□□□□□ -2.08
RFC1-209ENST00000504974 TSPO2Q5TGU0 170 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 PRMT9Q6P2P2 845 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 AGTRAPQ6RW13 159 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 SBSNQ6UWP8 590 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 CYHR1Q6ZMK1 362 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 MBOAT1Q6ZNC8 495 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 LINC01551Q86U37 167 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 CTAGE6Q86UF2 777 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 CTAGE3PQ8IX95 158 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 TMEM183AQ8IXX5 376 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 CPAMD8Q8IZJ3 1885 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 TCAIMQ8N3R3 496 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 MMGT1Q8N4V1 131 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 C2orf73Q8N5S3 287 aaPredicted RBP2.04□□□□□ -2.08
RFC1-209ENST00000504974 TBC1D19Q8N5T2 526 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 CEP112Q8N8E3 955 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 MNS1Q8NEH6 495 aa2.04□□□□□ -2.08
RFC1-209ENST00000504974 OR4F6Q8NGB9 312 aa2.04□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms