RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 A6NIN4 97 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 J3QT63 122 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 M0R1W7 72 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 MPZL2O60487 215 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 NDUFA7O95182 113 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 IGHV4-59P01825 116 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 GABRB1P18505 474 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 OMGP23515 440 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 KIR3DL2P43630 455 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 RPL5P46777 297 aaKnown RBP11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 GABARAPL2P60520 117 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 SLC25A30Q5SVS4 291 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 CLVS2Q5SYC1 327 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 BCL2L15Q5TBC7 163 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 FIP1L1Q6UN15 594 aaKnown RBP11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 SHISA2Q6UWI4 295 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 PDZD9Q8IXQ8 264 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 PNKDQ8N490 385 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 FBLIM1Q8WUP2 373 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 MED30Q96HR3 178 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 HIST1H2AAQ96QV6 131 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 TBX5Q99593 518 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 FAM192AQ9GZU8 254 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 SLITRK2Q9H156 845 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 VCX3AQ9NNX9 186 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 RASL12Q9NYN1 266 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 NDUFA13Q9P0J0 144 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 H2AFY2Q9P0M6 372 aaPredicted RBP11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 ZNRD1Q9P1U0 126 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 ONECUT1Q9UBC0 465 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 PCDHGB5Q9Y5G0 923 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 MEGF8Q7Z7M0 2845 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 WNK1Q9H4A3 2382 aa11.45□□□□□ -0.58
PDLIM7-211ENST00000504318 A6NHS1 94 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 NKX6-3A6NJ46 265 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 METTL15A6NJ78 407 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 POM121CA8CG34 1229 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 SULT1C4O75897 302 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 CCDC159P0C7I6 412 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 HAAOP46952 286 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 CEBPDP49716 269 aaPredicted RBP11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 KRTAP10-3P60369 221 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 CDC42P60953 191 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 TMED1Q13445 227 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 UBE2V2Q15819 145 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 TAF9Q16594 264 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 C6orf141Q5SZD1 244 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 COMMD2Q86X83 199 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 ZNF671Q8TAW3 534 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 C17orf50Q8WW18 174 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 SSMEM1Q8WWF3 244 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 WFDC12Q8WWY7 111 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 ZDHHC16Q969W1 377 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 ZNF649Q9BS31 505 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 C19orf12Q9NSK7 152 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 IMPAD1Q9NX62 359 aa11.44□□□□□ -0.58
PDLIM7-211ENST00000504318 VWFP04275 2813 aa11.43□□□□□ -0.58
PDLIM7-211ENST00000504318 RFPL4AA6NLU0 287 aa11.43□□□□□ -0.58
PDLIM7-211ENST00000504318 RFPL4AL1F8VTS6 287 aa11.43□□□□□ -0.58
PDLIM7-211ENST00000504318 F8VVB4 439 aa11.43□□□□□ -0.58
PDLIM7-211ENST00000504318 F8VWA3 439 aa11.43□□□□□ -0.58
PDLIM7-211ENST00000504318 SPRY1O43609 319 aaPredicted RBP11.43□□□□□ -0.58
PDLIM7-211ENST00000504318 RPP14O95059 124 aaKnown RBP11.43□□□□□ -0.58
PDLIM7-211ENST00000504318 RPL15P61313 204 aaKnown RBP11.43□□□□□ -0.58
PDLIM7-211ENST00000504318 CRIP3Q6Q6R5 217 aa11.43□□□□□ -0.58
PDLIM7-211ENST00000504318 YIPF7Q8N8F6 280 aa11.43□□□□□ -0.58
PDLIM7-211ENST00000504318 NPRL2Q8WTW4 380 aa11.43□□□□□ -0.58
PDLIM7-211ENST00000504318 DYRK2Q92630 601 aa11.43□□□□□ -0.58
PDLIM7-211ENST00000504318 PKIBQ9C010 78 aa11.43□□□□□ -0.58
PDLIM7-211ENST00000504318 CHST5Q9GZS9 411 aa11.43□□□□□ -0.58
PDLIM7-211ENST00000504318 TNFRSF19Q9NS68 423 aa11.43□□□□□ -0.58
PDLIM7-211ENST00000504318 SCN3BQ9NY72 215 aa11.43□□□□□ -0.58
PDLIM7-211ENST00000504318 TPRKBQ9Y3C4 175 aa11.43□□□□□ -0.58
PDLIM7-211ENST00000504318 TRBV23-1A0A0A0MS06 115 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 IGKV1-9A0A0C4DH69 117 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 SMIM31A0A1B0GVY4 71 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 DPPA5A6NC42 116 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 ANKRD61A6NGH8 418 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 TRIM64CA6NLI5 447 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 NPFFO15130 113 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 GPR137BO60478 399 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 MRPS14O60783 128 aaKnown RBP11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 ENTPD6O75354 484 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 KRT8P05787 483 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 NDUFB7P17568 137 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 GABRA2P47869 451 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 UBE2E1P51965 193 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 RAG2P55895 527 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 DLX6P56179 175 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 NANOS3P60323 173 aaKnown RBP11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 SNRPGP62308 76 aaKnown RBP11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 SRSF4Q08170 494 aaKnown RBP11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 IL24Q13007 206 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 OCLNQ16625 522 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 ODF4Q2M2E3 257 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 FDX2Q6P4F2 183 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 ZNF773Q6PK81 442 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 ANGPTL5Q86XS5 388 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 ZNF573Q86YE8 665 aa11.42□□□□□ -0.58
PDLIM7-211ENST00000504318 OR10H4Q8NGA5 316 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms