RNA–Protein interactions for RNA: ENST00000503360.1

HMGB1P35-201, Transcript of high mobility group box 1 pseudogene 35, humanhuman

BASIC

Gene HMGB1P35, Length 598 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P35-201ENST00000503360 TDGF1P13385 188 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 RAB3AP20336 220 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 HSD11B1P28845 292 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 CEACAM6P40199 344 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 IDH2P48735 452 aaKnown RBP1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 PSMB2P49721 201 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 TDGF1P3P51864 188 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 NCBP2P52298 156 aaKnown RBP eCLIP1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 AP2S1P53680 142 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 SYNJ2BPP57105 145 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 MTPNP58546 118 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 RPS23P62266 143 aaKnown RBP1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 CCL7P80098 99 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 GLO1Q04760 184 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 BAXQ07812 192 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 LAMTOR4Q0VGL1 99 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 MLLT11Q13015 90 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 PON3Q15166 354 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 SNCBQ16143 134 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 ACTBL2Q562R1 376 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 TFDP3Q5H9I0 405 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 STEAP4Q687X5 459 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 FAM173BQ6P4H8 233 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 LRRN1Q6UXK5 716 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 ZNF493Q6ZR52 646 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 RTL4Q6ZR62 310 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 Q6ZVH6 145 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 ZNF429Q86V71 674 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 BLIDQ8IZY5 108 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 GAPTQ8N292 157 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 STPG2Q8N412 459 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 COX18Q8N8Q8 333 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 NPBQ8NG41 125 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 OR11H7Q8NGC8 314 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 OR10AD1Q8NGE0 317 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 OR5B17Q8NGF7 314 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 OR52E4Q8NGH9 312 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 OR6N1Q8NGY5 312 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 STOML3Q8TAV4 291 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 PHOSPHO2Q8TCD6 241 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 TMEM158Q8WZ71 300 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 RNF185Q96GF1 192 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 FAM19A4Q96LR4 140 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 CCDC42Q96M95 316 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 PACRGQ96M98 296 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 Q96MT0 163 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 MBOAT7Q96N66 472 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 BIRC8Q96P09 236 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 PITX2Q99697 317 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 HDHD3Q9BSH5 251 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 EMC6Q9BV81 110 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 TMED9Q9BVK6 235 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 UGT2B28Q9BY64 529 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 SLIRPQ9GZT3 109 aaKnown RBP1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 METTL9Q9H1A3 318 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 SLC40A1Q9NP59 571 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 RRAGDQ9NQL2 400 aaPredicted RBP1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 DIABLOQ9NR28 239 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 SLC2A9Q9NRM0 540 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 DEC1Q9P2X7 70 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 VAX2Q9UIW0 290 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 GUCA1BQ9UMX6 200 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 NDRG2Q9UN36 371 aaKnown RBP1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 ZNF337Q9Y3M9 751 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 ORC6Q9Y5N6 252 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 HEBP2Q9Y5Z4 205 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 UBIAD1Q9Y5Z9 338 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 MRPS18BQ9Y676 258 aaKnown RBP1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 CEMIPQ8WUJ3 1361 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 ABCC11Q96J66 1382 aa1.58□□□□□ -2.16
HMGB1P35-201ENST00000503360 LTBP1Q14766 1721 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 ZCCHC6Q5VYS8 1495 aaKnown RBP1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 TRAV8-6A0A0B4J262 113 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 IGHV1-69DA0A0B4J2H0 117 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 A0A1W2PQL4 384 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 DAPL1A0PJW8 107 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 CEACAM18A8MTB9 384 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 F5H5T6 163 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 F5H768 121 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 J3QT63 122 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 LAD1O00515 517 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 AZIN1O14977 448 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 KMOO15229 486 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 DENRO43583 198 aaKnown RBP1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 SLC22A5O76082 557 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 GLSO94925 669 aaPredicted RBP1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 SEMA3DO95025 777 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 LYPLA2O95372 231 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 SLC25A27O95847 323 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 BGLAPP02818 100 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 FABP3P05413 133 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 CALB1P05937 261 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 BCHEP06276 602 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 RPS17P08708 135 aaKnown RBP1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 CD3GP09693 182 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 ZDHHC11BP0C7U3 371 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 SLC2A1P11166 492 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 ATF1P18846 271 aa1.57□□□□□ -2.16
HMGB1P35-201ENST00000503360 CXCR1P25024 350 aa1.57□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms