RNA–Protein interactions for RNA: ENST00000501271.2

CLIP1-204, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 2,426 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-204ENST00000501271 PIGYQ3MUY2 71 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 FAM74A3Q4VXF1 159 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 TMEM42Q69YG0 159 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 BRICD5Q6PL45 260 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 UQCC3Q6UW78 93 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 TIPARPQ7Z3E1 657 aaKnown RBP8.56□□□□□ -1.04
CLIP1-204ENST00000501271 FOXRED2Q8IWF2 684 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 CCDC36Q8IYA8 594 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 OR2V1Q8NHB1 315 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 ABHD3Q8WU67 409 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 BORCS8Q96FH0 119 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 OR2H1Q9GZK4 316 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 SLC5A7Q9GZV3 580 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 SLC6A15Q9H2J7 730 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 OR2S2Q9NQN1 319 aa8.56□□□□□ -1.04
CLIP1-204ENST00000501271 hCG_38984A0A1B0GV85 526 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 RAB19A4D1S5 217 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 CRYM-AS1A6NIL9 109 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 B4E171 279 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 TERTO14746 1132 aaKnown RBP8.55□□□□□ -1.04
CLIP1-204ENST00000501271 GEMIN2O14893 280 aaKnown RBP8.55□□□□□ -1.04
CLIP1-204ENST00000501271 NRASP01111 189 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 IGHEP01854 428 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 CTSDP07339 412 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-204ENST00000501271 FCGR3AP08637 254 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 OR5H8P0DN80 308 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 TCN2P20062 427 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 CHATP28329 748 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 TSPAN7P41732 249 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 SRSF3P84103 164 aaKnown RBP8.55□□□□□ -1.04
CLIP1-204ENST00000501271 FAM3AP98173 230 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 ZNF92Q03936 586 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 STK11Q15831 433 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 PLEKHN1Q494U1 663 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-204ENST00000501271 ACER2Q5QJU3 275 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 SKA3Q8IX90 412 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 CT55Q8WUE5 264 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 RNF141Q8WVD5 230 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 MARS2Q96GW9 593 aaKnown RBP8.55□□□□□ -1.04
CLIP1-204ENST00000501271 DECR2Q9NUI1 292 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 C1orf123Q9NWV4 160 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 HSF4Q9ULV5 492 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 SHANK1Q9Y566 2161 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 C19orf67A6NJJ6 358 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 ABCD4O14678 606 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 PET100P0DJ07 73 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 ZNF708P17019 499 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 GDF1P27539 372 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 ECI1P42126 302 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 SPEM2Q0P670 501 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 LPAL2Q16609 132 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 IAH1Q2TAA2 248 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-204ENST00000501271 DCAF12Q5T6F0 453 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 H3F3CQ6NXT2 135 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 ASCL4Q6XD76 172 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 LHFPL2Q6ZUX7 228 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 OR10AD1Q8NGE0 317 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 CMSS1Q9BQ75 279 aaKnown RBP8.55□□□□□ -1.04
CLIP1-204ENST00000501271 NKX6-2Q9C056 277 aaPredicted RBP8.55□□□□□ -1.04
CLIP1-204ENST00000501271 GPR35Q9HC97 309 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 DNAJB11Q9UBS4 358 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 PADI1Q9ULC6 663 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 EDARQ9UNE0 448 aa8.55□□□□□ -1.04
CLIP1-204ENST00000501271 TMEM218A2RU14 115 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 FAM221AA4D161 298 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 ZNF587BE7ETH6 402 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 GPR31O00270 319 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 ATG12O94817 140 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 IGHV3-9P01782 118 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 HKR1P10072 659 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 EDN3P14138 238 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 RCC1P18754 421 aaPredicted RBP8.54□□□□□ -1.04
CLIP1-204ENST00000501271 MST1LQ2TV78 715 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 OR2A2Q6IF42 318 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 TCEAL6Q6IPX3 200 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 SLC23A3Q6PIS1 610 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 SGPP2Q8IWX5 399 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 FBXL14Q8N1E6 418 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 TMEM105Q8N8V8 129 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 OR4A4PQ8NGN8 299 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 ADAMTS17Q8TE56 1095 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 TCEAL3Q969E4 200 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 TOMM40LQ969M1 308 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 MRPL24Q96A35 216 aaKnown RBP8.54□□□□□ -1.04
CLIP1-204ENST00000501271 CPNE2Q96FN4 548 aaPredicted RBP8.54□□□□□ -1.04
CLIP1-204ENST00000501271 MEMO1Q9Y316 297 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 LOXL2Q9Y4K0 774 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 TIMM10BQ9Y5J6 103 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 ZNF850A8MQ14 1090 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 ICAM2P13598 275 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 DTYMKP23919 212 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 GFRA1P56159 465 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 PIGPP57054 158 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 FOXO1Q12778 655 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 PDCD1Q15116 288 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 ZNF528Q3MIS6 628 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 RIPPLY2Q5TAB7 128 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 RPL7L1Q6DKI1 246 aaKnown RBP8.54□□□□□ -1.04
CLIP1-204ENST00000501271 Q6ZPA2 131 aa8.54□□□□□ -1.04
CLIP1-204ENST00000501271 ZNF100Q8IYN0 542 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms