RNA–Protein interactions for RNA: ENST00000498808.5

HDAC6-236, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-236ENST00000498808 KLHL30-AS1Q8NEE0 82 aa12.35□□□□□ -0.43
HDAC6-236ENST00000498808 NRIP2Q9BQI9 281 aa12.35□□□□□ -0.43
HDAC6-236ENST00000498808 HES4Q9HCC6 221 aa12.35□□□□□ -0.43
HDAC6-236ENST00000498808 SESN1Q9Y6P5 492 aa12.35□□□□□ -0.43
HDAC6-236ENST00000498808 J3QT63 122 aa12.34□□□□□ -0.43
HDAC6-236ENST00000498808 DNAJC8O75937 253 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-236ENST00000498808 SLC6A1P30531 599 aa12.34□□□□□ -0.43
HDAC6-236ENST00000498808 HAAOP46952 286 aa12.34□□□□□ -0.43
HDAC6-236ENST00000498808 NUDT2P50583 147 aa12.34□□□□□ -0.43
HDAC6-236ENST00000498808 PSMA6P60900 246 aaKnown RBP12.34□□□□□ -0.43
HDAC6-236ENST00000498808 PLCXD3Q63HM9 321 aa12.34□□□□□ -0.43
HDAC6-236ENST00000498808 SHFQ7M4L6 423 aa12.34□□□□□ -0.43
HDAC6-236ENST00000498808 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-236ENST00000498808 OR9Q2Q8NGE9 314 aa12.34□□□□□ -0.43
HDAC6-236ENST00000498808 STMN2Q93045 179 aa12.34□□□□□ -0.43
HDAC6-236ENST00000498808 HOPXQ9BPY8 73 aaPredicted RBP12.34□□□□□ -0.43
HDAC6-236ENST00000498808 BTBD10Q9BSF8 475 aa12.34□□□□□ -0.43
HDAC6-236ENST00000498808 TSSK6Q9BXA6 273 aa12.34□□□□□ -0.43
HDAC6-236ENST00000498808 CLEC7AQ9BXN2 247 aa12.34□□□□□ -0.43
HDAC6-236ENST00000498808 TMEM133Q9H2Q1 129 aa12.34□□□□□ -0.43
HDAC6-236ENST00000498808 MED20Q9H944 212 aa12.34□□□□□ -0.43
HDAC6-236ENST00000498808 PALMDQ9NP74 551 aa12.34□□□□□ -0.43
HDAC6-236ENST00000498808 HHLA2Q9UM44 414 aa12.34□□□□□ -0.43
HDAC6-236ENST00000498808 SLC22A13Q9Y226 551 aa12.34□□□□□ -0.43
HDAC6-236ENST00000498808 MMP23AO75900 390 aa12.33□□□□□ -0.44
HDAC6-236ENST00000498808 GSTT1P30711 240 aa12.33□□□□□ -0.44
HDAC6-236ENST00000498808 BRS3P32247 399 aa12.33□□□□□ -0.44
HDAC6-236ENST00000498808 ECI1P42126 302 aa12.33□□□□□ -0.44
HDAC6-236ENST00000498808 OR3A4PP47883 348 aa12.33□□□□□ -0.44
HDAC6-236ENST00000498808 RASSF6Q6ZTQ3 369 aa12.33□□□□□ -0.44
HDAC6-236ENST00000498808 TRPM8Q7Z2W7 1104 aa12.33□□□□□ -0.44
HDAC6-236ENST00000498808 SBSPONQ8IVN8 264 aa12.33□□□□□ -0.44
HDAC6-236ENST00000498808 RP9Q8TA86 221 aaKnown RBP12.33□□□□□ -0.44
HDAC6-236ENST00000498808 RAX2Q96IS3 184 aa12.33□□□□□ -0.44
HDAC6-236ENST00000498808 NOL4LQ96MY1 436 aaPredicted RBP12.33□□□□□ -0.44
HDAC6-236ENST00000498808 MYLK2Q9H1R3 596 aa12.33□□□□□ -0.44
HDAC6-236ENST00000498808 NIPAL2Q9H841 368 aa12.33□□□□□ -0.44
HDAC6-236ENST00000498808 ZFP57Q9NU63 452 aa12.33□□□□□ -0.44
HDAC6-236ENST00000498808 DPM3Q9P2X0 92 aa12.33□□□□□ -0.44
HDAC6-236ENST00000498808 ABCD2Q9UBJ2 740 aa12.33□□□□□ -0.44
HDAC6-236ENST00000498808 FAM183AA6NL82 134 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 LYNP07948 512 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 GP2P55259 537 aaKnown RBP12.32□□□□□ -0.44
HDAC6-236ENST00000498808 RAB25P57735 213 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 ERVK11-1P61568 191 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 MEF2CQ06413 473 aaPredicted RBP12.32□□□□□ -0.44
HDAC6-236ENST00000498808 C9orf66Q5T8R8 295 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 ZFAND6Q6FIF0 208 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 CGB2Q6NT52 195 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 PLBD1Q6P4A8 553 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 BAIAP2L2Q6UXY1 529 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 GDPD3Q7L5L3 318 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 ZNF695Q8IW36 515 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 OR8H2Q8N162 312 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 TPRX1Q8N7U7 411 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 OTOSQ8NHW6 89 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 PYURFQ96I23 114 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 ARMC1Q9NVT9 282 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 TAS2R1Q9NYW7 299 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 SCOCQ9UIL1 159 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 POLDIP2Q9Y2S7 368 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 KLHDC2Q9Y2U9 406 aa12.32□□□□□ -0.44
HDAC6-236ENST00000498808 A0A0U1RQV5 110 aa12.31□□□□□ -0.44
HDAC6-236ENST00000498808 CCL24O00175 119 aa12.31□□□□□ -0.44
HDAC6-236ENST00000498808 COX4I1P13073 169 aa12.31□□□□□ -0.44
HDAC6-236ENST00000498808 MPZP25189 248 aa12.31□□□□□ -0.44
HDAC6-236ENST00000498808 RIPPLY1Q0D2K3 151 aa12.31□□□□□ -0.44
HDAC6-236ENST00000498808 EDDM3AQ14507 147 aa12.31□□□□□ -0.44
HDAC6-236ENST00000498808 SNAPC1Q16533 368 aa12.31□□□□□ -0.44
HDAC6-236ENST00000498808 ZBTB49Q6ZSB9 765 aa12.31□□□□□ -0.44
HDAC6-236ENST00000498808 ZNF573Q86YE8 665 aa12.31□□□□□ -0.44
HDAC6-236ENST00000498808 EGFL6Q8IUX8 553 aa12.31□□□□□ -0.44
HDAC6-236ENST00000498808 THEM6Q8WUY1 208 aa12.31□□□□□ -0.44
HDAC6-236ENST00000498808 BAIAP2Q9UQB8 552 aa12.31□□□□□ -0.44
HDAC6-236ENST00000498808 LINC00312Q9Y6C7 94 aa12.31□□□□□ -0.44
HDAC6-236ENST00000498808 hADV38S2A0JD32 116 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 TMEM82A0PJX8 343 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 PQLC2LA1A4F0 135 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 M0QZK8 103 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 NDUFAB1O14561 156 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 SELENOFO60613 162 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 SOX14O95416 240 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 NRASP01111 189 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 GASTP01350 101 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 IFNGP01579 166 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 IGLV3-1P01715 115 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 ZNF3P17036 446 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 BDH1Q02338 343 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 ZNF684Q5T5D7 378 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 OR2T33Q8NG76 320 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 CHPT1Q8WUD6 406 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 CMC2Q9NRP2 79 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 FAM206AQ9NX38 181 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 LINC00527Q9UJ94 153 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 PIGLQ9Y2B2 252 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 ZNF256Q9Y2P7 627 aaPredicted RBP12.3□□□□□ -0.44
HDAC6-236ENST00000498808 LYVE1Q9Y5Y7 322 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 SMAD5-AS1Q9Y6J3 95 aa12.3□□□□□ -0.44
HDAC6-236ENST00000498808 RIIAD1A6NNX1 92 aa12.29□□□□□ -0.44
HDAC6-236ENST00000498808 F8VVB4 439 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms