RNA–Protein interactions for RNA: ENST00000498438.1

HOXD11-202, Transcript of homeobox D11, humanhuman

TSL 1 (best)

Gene HOXD11, Length 1,259 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXD11-202ENST00000498438 PP6455Q8WZ26 134 aa15.12■□□□□ 0.01
HOXD11-202ENST00000498438 ADAT3Q96EY9 351 aaPredicted RBP15.12■□□□□ 0.01
HOXD11-202ENST00000498438 PELI1Q96FA3 418 aa15.12■□□□□ 0.01
HOXD11-202ENST00000498438 MRPL48Q96GC5 212 aaKnown RBP15.12■□□□□ 0.01
HOXD11-202ENST00000498438 ALG8Q9BVK2 526 aa15.12■□□□□ 0.01
HOXD11-202ENST00000498438 NOX4Q9NPH5 578 aa15.12■□□□□ 0.01
HOXD11-202ENST00000498438 SLC1A7O00341 560 aa15.11■□□□□ 0.01
HOXD11-202ENST00000498438 FADS2O95864 444 aaKnown RBP15.11■□□□□ 0.01
HOXD11-202ENST00000498438 SERPINA3P01011 423 aa15.11■□□□□ 0.01
HOXD11-202ENST00000498438 IGHA1P01876 353 aa15.11■□□□□ 0.01
HOXD11-202ENST00000498438 ISG15P05161 165 aa15.11■□□□□ 0.01
HOXD11-202ENST00000498438 PRDX2P32119 198 aa15.11■□□□□ 0.01
HOXD11-202ENST00000498438 CCR9P51686 369 aa15.11■□□□□ 0.01
HOXD11-202ENST00000498438 ERVK11-1P61568 191 aa15.11■□□□□ 0.01
HOXD11-202ENST00000498438 RAB40BQ12829 278 aa15.11■□□□□ 0.01
HOXD11-202ENST00000498438 CNN3Q15417 329 aaKnown RBP15.11■□□□□ 0.01
HOXD11-202ENST00000498438 METAP1DQ6UB28 335 aaPredicted RBP15.11■□□□□ 0.01
HOXD11-202ENST00000498438 Q6YL49 198 aa15.11■□□□□ 0.01
HOXD11-202ENST00000498438 FAM185AQ8N0U4 392 aa15.11■□□□□ 0.01
HOXD11-202ENST00000498438 C3orf56Q8N813 242 aa15.11■□□□□ 0.01
HOXD11-202ENST00000498438 ZNF555Q8NEP9 628 aa15.11■□□□□ 0.01
HOXD11-202ENST00000498438 OR10AC1Q8NH08 325 aa15.11■□□□□ 0.01
HOXD11-202ENST00000498438 BORCS8Q96FH0 119 aa15.11■□□□□ 0.01
HOXD11-202ENST00000498438 RDH12Q96NR8 316 aa15.11■□□□□ 0.01
HOXD11-202ENST00000498438 TNFRSF19Q9NS68 423 aa15.11■□□□□ 0.01
HOXD11-202ENST00000498438 OR14J1Q9UGF5 321 aa15.11■□□□□ 0.01
HOXD11-202ENST00000498438 TRBV23-1A0A0A0MS06 115 aa15.1■□□□□ 0.01
HOXD11-202ENST00000498438 A0A0U1RQK1 487 aa15.1■□□□□ 0.01
HOXD11-202ENST00000498438 OR4C45A6NMZ5 311 aa15.1■□□□□ 0.01
HOXD11-202ENST00000498438 M0R1W7 72 aa15.1■□□□□ 0.01
HOXD11-202ENST00000498438 MELTFP08582 738 aa15.1■□□□□ 0.01
HOXD11-202ENST00000498438 ZNF20P17024 532 aa15.1■□□□□ 0.01
HOXD11-202ENST00000498438 KLRD1Q13241 179 aa15.1■□□□□ 0.01
HOXD11-202ENST00000498438 ALKBH1Q13686 389 aaKnown RBP15.1■□□□□ 0.01
HOXD11-202ENST00000498438 SYS1Q8N2H4 156 aa15.1■□□□□ 0.01
HOXD11-202ENST00000498438 PIP4P2Q8N4L2 257 aa15.1■□□□□ 0.01
HOXD11-202ENST00000498438 ZNF561Q8N587 486 aa15.1■□□□□ 0.01
HOXD11-202ENST00000498438 OR51A4Q8NGJ6 313 aa15.1■□□□□ 0.01
HOXD11-202ENST00000498438 SLAMF9Q96A28 289 aa15.1■□□□□ 0.01
HOXD11-202ENST00000498438 FGGYQ96C11 551 aa15.1■□□□□ 0.01
HOXD11-202ENST00000498438 CEP19Q96LK0 163 aa15.1■□□□□ 0.01
HOXD11-202ENST00000498438 MYCBPQ99417 103 aaPredicted RBP15.1■□□□□ 0.01
HOXD11-202ENST00000498438 ISG20L2Q9H9L3 353 aaKnown RBP15.1■□□□□ 0.01
HOXD11-202ENST00000498438 INPP5EQ9NRR6 644 aa15.1■□□□□ 0.01
HOXD11-202ENST00000498438 C19orf12Q9NSK7 152 aa15.1■□□□□ 0.01
HOXD11-202ENST00000498438 ERVK13-1Q9NX77 482 aa15.1■□□□□ 0.01
HOXD11-202ENST00000498438 MTCH1Q9NZJ7 389 aa15.1■□□□□ 0.01
HOXD11-202ENST00000498438 RPL36Q9Y3U8 105 aaKnown RBP15.1■□□□□ 0.01
HOXD11-202ENST00000498438 IGKV1-9A0A0C4DH69 117 aa15.09■□□□□ 0.01
HOXD11-202ENST00000498438 F8VVB4 439 aa15.09■□□□□ 0.01
HOXD11-202ENST00000498438 F8VWA3 439 aa15.09■□□□□ 0.01
HOXD11-202ENST00000498438 RNASEK-C17orf49H0YIS7 233 aa15.09■□□□□ 0.01
HOXD11-202ENST00000498438 INMTO95050 263 aa15.09■□□□□ 0.01
HOXD11-202ENST00000498438 KNG1P01042 644 aa15.09■□□□□ 0.01
HOXD11-202ENST00000498438 GUCA2AQ02747 115 aa15.09■□□□□ 0.01
HOXD11-202ENST00000498438 FOXL1Q12952 345 aa15.09■□□□□ 0.01
HOXD11-202ENST00000498438 LRRC36Q1X8D7 754 aa15.09■□□□□ 0.01
HOXD11-202ENST00000498438 C16orf87Q6PH81 154 aa15.09■□□□□ 0.01
HOXD11-202ENST00000498438 C1orf122Q6ZSJ8 110 aa15.09■□□□□ 0.01
HOXD11-202ENST00000498438 SLC25A26Q70HW3 274 aa15.09■□□□□ 0.01
HOXD11-202ENST00000498438 UTS2BQ765I0 119 aa15.09■□□□□ 0.01
HOXD11-202ENST00000498438 ZNF676Q8N7Q3 588 aa15.09■□□□□ 0.01
HOXD11-202ENST00000498438 OR52I1Q8NGK6 324 aa15.09■□□□□ 0.01
HOXD11-202ENST00000498438 OR13C3Q8NGS6 347 aa15.09■□□□□ 0.01
HOXD11-202ENST00000498438 TAF15Q92804 592 aaKnown RBP eCLIP15.09■□□□□ 0.01
HOXD11-202ENST00000498438 TNFRSF14Q92956 283 aa15.09■□□□□ 0.01
HOXD11-202ENST00000498438 ZNF649Q9BS31 505 aa15.09■□□□□ 0.01
HOXD11-202ENST00000498438 METTL8Q9H825 291 aaKnown RBP15.09■□□□□ 0.01
HOXD11-202ENST00000498438 HHLA2Q9UM44 414 aa15.09■□□□□ 0.01
HOXD11-202ENST00000498438 WBP4O75554 376 aaKnown RBP15.08■□□□□ 0
HOXD11-202ENST00000498438 ATF1P18846 271 aa15.08■□□□□ 0
HOXD11-202ENST00000498438 RBP2P50120 134 aa15.08■□□□□ 0
HOXD11-202ENST00000498438 ATP1B3P54709 279 aa15.08■□□□□ 0
HOXD11-202ENST00000498438 RCN1Q15293 331 aa15.08■□□□□ 0
HOXD11-202ENST00000498438 SMN1Q16637 294 aaKnown RBP15.08■□□□□ 0
HOXD11-202ENST00000498438 LPCAT4Q643R3 524 aa15.08■□□□□ 0
HOXD11-202ENST00000498438 TMEM86BQ8N661 226 aa15.08■□□□□ 0
HOXD11-202ENST00000498438 DNAAF1Q8NEP3 725 aa15.08■□□□□ 0
HOXD11-202ENST00000498438 SSMEM1Q8WWF3 244 aa15.08■□□□□ 0
HOXD11-202ENST00000498438 UNKLQ9H9P5 680 aaKnown RBP15.08■□□□□ 0
HOXD11-202ENST00000498438 MRPS18AQ9NVS2 196 aaKnown RBP15.08■□□□□ 0
HOXD11-202ENST00000498438 A0A1W2PRD5 423 aa15.07■□□□□ 0
HOXD11-202ENST00000498438 A0A1W2PRF3 423 aa15.07■□□□□ 0
HOXD11-202ENST00000498438 A0A1W2PRM7 423 aa15.07■□□□□ 0
HOXD11-202ENST00000498438 CLIC3O95833 236 aa15.07■□□□□ 0
HOXD11-202ENST00000498438 AZGP1P25311 298 aaKnown RBP15.07■□□□□ 0
HOXD11-202ENST00000498438 PEX2P28328 305 aa15.07■□□□□ 0
HOXD11-202ENST00000498438 POU3F4P49335 361 aa15.07■□□□□ 0
HOXD11-202ENST00000498438 RPL31P62899 125 aaKnown RBP15.07■□□□□ 0
HOXD11-202ENST00000498438 COL10A1Q03692 680 aa15.07■□□□□ 0
HOXD11-202ENST00000498438 BLMHQ13867 455 aa15.07■□□□□ 0
HOXD11-202ENST00000498438 KLHL22Q53GT1 634 aa15.07■□□□□ 0
HOXD11-202ENST00000498438 ZNF691Q5VV52 312 aa15.07■□□□□ 0
HOXD11-202ENST00000498438 NCR3LG1Q68D85 454 aa15.07■□□□□ 0
HOXD11-202ENST00000498438 LDLRAD3Q86YD5 345 aa15.07■□□□□ 0
HOXD11-202ENST00000498438 PNKDQ8N490 385 aa15.07■□□□□ 0
HOXD11-202ENST00000498438 CYGBQ8WWM9 190 aa15.07■□□□□ 0
HOXD11-202ENST00000498438 CHIAQ9BZP6 476 aa15.07■□□□□ 0
HOXD11-202ENST00000498438 POMT1Q9Y6A1 747 aa15.07■□□□□ 0
HOXD11-202ENST00000498438 FAM181BA6NEQ2 426 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms