RNA–Protein interactions for RNA: ENST00000497470.1

SCAMP3-209, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 845 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-209ENST00000497470 LINC00596Q86U02 117 aa16.61■□□□□ 0.25
SCAMP3-209ENST00000497470 OR4D6Q8NGJ1 314 aa16.61■□□□□ 0.25
SCAMP3-209ENST00000497470 KCNG3Q8TAE7 436 aa16.61■□□□□ 0.25
SCAMP3-209ENST00000497470 RAB1CQ92928 201 aa16.61■□□□□ 0.25
SCAMP3-209ENST00000497470 YIPF5Q969M3 257 aa16.61■□□□□ 0.25
SCAMP3-209ENST00000497470 TIMD4Q96H15 378 aa16.61■□□□□ 0.25
SCAMP3-209ENST00000497470 SPACA5Q96QH8 159 aa16.61■□□□□ 0.25
SCAMP3-209ENST00000497470 FOXC2Q99958 501 aa16.61■□□□□ 0.25
SCAMP3-209ENST00000497470 CST11Q9H112 138 aa16.61■□□□□ 0.25
SCAMP3-209ENST00000497470 SMURF1Q9HCE7 757 aa16.61■□□□□ 0.25
SCAMP3-209ENST00000497470 UFSP2Q9NUQ7 469 aa16.61■□□□□ 0.25
SCAMP3-209ENST00000497470 CCDC59Q9P031 241 aaKnown RBP16.61■□□□□ 0.25
SCAMP3-209ENST00000497470 ETV7Q9Y603 341 aa16.61■□□□□ 0.25
SCAMP3-209ENST00000497470 A3GALT2U3KPV4 340 aa16.61■□□□□ 0.25
SCAMP3-209ENST00000497470 TRAV38-1A0A0B4J264 116 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 FAM90A10PA6NDY2 464 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 FAM90A18PA6NE21 464 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 FAM90A16PA6NEW6 464 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 FAM90A20PA6NIJ5 464 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 FAM90A8PA6NJQ4 464 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 FAM90A7PA6NKC0 464 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 FAM90A22PA8MWA6 464 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 FAM90A12PA8MX19 464 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 FAM90A5PA8MXJ8 464 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 FAM90A23PA8MXZ1 464 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 LGALS8O00214 317 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 SYNGR1O43759 233 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 FAM90A15PP0C7V4 464 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 FAM90A13PP0C7W8 464 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 FAM90A14PP0C7W9 464 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 FAM90A24PP0C7X0 464 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 COL8A2P25067 703 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 SOX6P35712 828 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 OR3A4PP47883 348 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 POU3F4P49335 361 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 FGF12P61328 243 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 SMIM21Q3B7S5 101 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 TMEM155Q4W5P6 130 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 SPIN3Q5JUX0 258 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 ATPAF1Q5TC12 328 aaPredicted RBP16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 SHEQ5VZ18 495 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 AWAT2Q6E213 333 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 FIP1L1Q6UN15 594 aaKnown RBP16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 DYNC2LI1Q8TCX1 351 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 LRRC29Q8WV35 223 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 AP3S1Q92572 193 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 CCL17Q92583 94 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 NRGNQ92686 78 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 HMG20AQ9NP66 347 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 HECTD1Q9ULT8 2610 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 DYSFO75923 2080 aa16.6■□□□□ 0.25
SCAMP3-209ENST00000497470 FBN2P35556 2912 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 CELSR2Q9HCU4 2923 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 PPIAL4EA0A075B759 164 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 IGKV1-12A0A0C4DH73 117 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 hCG_1807616A0A1W2PRN6 198 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 TMEM14DPA8MWL7 114 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 PPIAL4DF5H284 164 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 LDLRAD4O15165 306 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 RHBDL1O75783 438 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 KNG1P01042 644 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 IGKV1D-12P01611 117 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 CSTBP04080 98 aaKnown RBP16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 PPIAL4FP0DN26 164 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 GTF2F2P13984 249 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 ARSBP15848 533 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 ZNF182P17025 639 aaPredicted RBP16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 RAB6AP20340 208 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 OR10A3P58181 314 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 QRFPP83859 136 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 IL13RA2Q14627 380 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 SPCS2Q15005 226 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 ZNF146Q15072 292 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 RSU1Q15404 277 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 GLIPR1L1Q6UWM5 242 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 ZNF826PQ6ZT77 177 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 LRRC28Q86X40 367 aaPredicted RBP16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 MUC20Q8N307 709 aaPredicted RBP16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 FAM3DQ96BQ1 224 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 IFT22Q9H7X7 185 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 PPIAL4AQ9Y536 164 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 CRYBG3Q68DQ2 2970 aa16.59■□□□□ 0.25
SCAMP3-209ENST00000497470 ARID1AO14497 2285 aa16.58■□□□□ 0.25
SCAMP3-209ENST00000497470 NAV2Q8IVL1 2488 aa16.58■□□□□ 0.25
SCAMP3-209ENST00000497470 CCDC160A6NGH7 325 aa16.58■□□□□ 0.24
SCAMP3-209ENST00000497470 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.58■□□□□ 0.24
SCAMP3-209ENST00000497470 SPRY1O43609 319 aaPredicted RBP16.58■□□□□ 0.24
SCAMP3-209ENST00000497470 NDUFS7O75251 213 aa16.58■□□□□ 0.24
SCAMP3-209ENST00000497470 GLRA1P23415 457 aa16.58■□□□□ 0.24
SCAMP3-209ENST00000497470 MDH2P40926 338 aaKnown RBP16.58■□□□□ 0.24
SCAMP3-209ENST00000497470 MXD1Q05195 221 aa16.58■□□□□ 0.24
SCAMP3-209ENST00000497470 MICBQ29980 383 aa16.58■□□□□ 0.24
SCAMP3-209ENST00000497470 C11orf91Q3C1V1 193 aa16.58■□□□□ 0.24
SCAMP3-209ENST00000497470 CLEC2AQ6UVW9 174 aa16.58■□□□□ 0.24
SCAMP3-209ENST00000497470 ACP7Q6ZNF0 438 aa16.58■□□□□ 0.24
SCAMP3-209ENST00000497470 RNF144BQ7Z419 303 aa16.58■□□□□ 0.24
SCAMP3-209ENST00000497470 C1QL2Q7Z5L3 287 aa16.58■□□□□ 0.24
SCAMP3-209ENST00000497470 FAM58AQ8N1B3 248 aa16.58■□□□□ 0.24
SCAMP3-209ENST00000497470 RFT1Q96AA3 541 aa16.58■□□□□ 0.24
SCAMP3-209ENST00000497470 KAAG1Q9UBP8 84 aa16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms