RNA–Protein interactions for RNA: ENST00000497203.1

SMC4-225, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 490 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-225ENST00000497203 MFNGO00587 321 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 ZMPSTE24O75844 475 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 CD28P10747 220 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 CELP19835 753 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 RANBP1P43487 201 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 SLC18A1P54219 525 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 ELF3P78545 371 aaPredicted RBP2.22□□□□□ -2.05
SMC4-225ENST00000497203 XIAPP98170 497 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 PMVKQ15126 192 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 C18orf21Q32NC0 220 aaPredicted RBP2.22□□□□□ -2.05
SMC4-225ENST00000497203 ATP6AP1LQ52LC2 224 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 FBXO48Q5FWF7 155 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 PRR9Q5T870 116 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 RESP18Q5W5W9 173 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 FAM231DQ6ZW35 169 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 TRMT10CQ7L0Y3 403 aaKnown RBP2.22□□□□□ -2.05
SMC4-225ENST00000497203 RBM45Q8IUH3 476 aaKnown RBP2.22□□□□□ -2.05
SMC4-225ENST00000497203 OR8K3Q8NH51 312 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 YIPF6Q96EC8 236 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 ADTRPQ96IZ2 230 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 SMIM8Q96KF7 97 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 VAT1Q99536 393 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 CIB1Q99828 191 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 TSGA10Q9BZW7 698 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 PORCNQ9H237 461 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 C12orf4Q9NQ89 552 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 NLE1Q9NVX2 485 aaPredicted RBP2.22□□□□□ -2.05
SMC4-225ENST00000497203 STX18Q9P2W9 335 aaKnown RBP2.22□□□□□ -2.05
SMC4-225ENST00000497203 HMGXB4Q9UGU5 601 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 RWDD2AQ9UIY3 292 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 ANXA10Q9UJ72 324 aa2.22□□□□□ -2.05
SMC4-225ENST00000497203 IGKV1-6A0A0C4DH72 117 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 LOC100506127A0A0U1RQW1 187 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 GOLGA6L4A6NEF3 574 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 ZNF879B4DU55 563 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 K7EN84 100 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 UPK1AO00322 258 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 UPK2O00526 184 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 SC5DO75845 299 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 IGKV1-39P01597 117 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 IGLV7-43P04211 117 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 IGKV1D-39P04432 117 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 NUDT2P50583 147 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 TNNC1P63316 161 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 Q3ZCU0 254 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 LIN9Q5TKA1 542 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 FAM104BQ5XKR9 115 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 APOBEC3HQ6NTF7 200 aaKnown RBP2.21□□□□□ -2.06
SMC4-225ENST00000497203 FAHD1Q6P587 224 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 C16orf47Q6ZP98 133 aaPredicted RBP2.21□□□□□ -2.06
SMC4-225ENST00000497203 OR4K2Q8NGD2 314 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 ZNF420Q8TAQ5 688 aaPredicted RBP2.21□□□□□ -2.06
SMC4-225ENST00000497203 SPACA5Q96QH8 159 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 HINT2Q9BX68 163 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 SHCBP1LQ9BZQ2 653 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 ABCB9Q9NP78 766 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 ACOT13Q9NPJ3 140 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 ZNF302Q9NR11 478 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 CA10Q9NS85 328 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 RBM22Q9NW64 420 aaKnown RBP eCLIP2.21□□□□□ -2.06
SMC4-225ENST00000497203 DDIT4Q9NX09 232 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 RBMX2Q9Y388 322 aaKnown RBP2.21□□□□□ -2.06
SMC4-225ENST00000497203 KIAA1671Q9BY89 1806 aa2.21□□□□□ -2.06
SMC4-225ENST00000497203 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.2□□□□□ -2.06
SMC4-225ENST00000497203 THADAQ6YHU6 1953 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 IGHV1-46P01743 117 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 GDI2P50395 445 aaKnown RBP2.2□□□□□ -2.06
SMC4-225ENST00000497203 VSNL1P62760 191 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 STX4Q12846 297 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 TMED1Q13445 227 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 SP6Q3SY56 376 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 ACTL10Q5JWF8 245 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 KCTD16Q68DU8 428 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 SSX6Q7RTT6 188 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 CYP4Z1Q86W10 505 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 ITPRIPQ8IWB1 547 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 LRRC8AQ8IWT6 810 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 CYP4Z2PQ8N1L4 340 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 ATPAF2Q8N5M1 289 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 CCNYL1Q8N7R7 359 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 SPERTQ8NA61 448 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 FAM57AQ8TBR7 257 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 YIPF5Q969M3 257 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 BEX2Q9BXY8 128 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 MS4A8Q9BY19 250 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 LINC00574Q9H8X3 128 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 SDHAF3Q9NRP4 125 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 AGPAT3Q9NRZ7 376 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 DNAJC27Q9NZQ0 273 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 ZNF229Q9UJW7 825 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 INSIG2Q9Y5U4 225 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 SLC22A7Q9Y694 548 aa2.2□□□□□ -2.06
SMC4-225ENST00000497203 ELP1O95163 1332 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 IGKV1D-17A0A075B6S4 117 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 KIR2DS1A0A191URI9 304 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 MGAT4DA6NG13 374 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 OR6C70A6NIJ9 312 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 K7EM74 188 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 SLC37A4O43826 429 aa2.19□□□□□ -2.06
SMC4-225ENST00000497203 OR2A4O95047 310 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms