RNA–Protein interactions for RNA: ENST00000496567.5

C9orf3-222, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,575 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-222ENST00000496567 FSTL3O95633 263 aa18.29■□□□□ 0.52
C9orf3-222ENST00000496567 PPIAL4FP0DN26 164 aa18.29■□□□□ 0.52
C9orf3-222ENST00000496567 GLRA1P23415 457 aa18.29■□□□□ 0.52
C9orf3-222ENST00000496567 TGFBR1P36897 503 aa18.29■□□□□ 0.52
C9orf3-222ENST00000496567 GPR6P46095 362 aaPredicted RBP18.29■□□□□ 0.52
C9orf3-222ENST00000496567 MXD1Q05195 221 aa18.29■□□□□ 0.52
C9orf3-222ENST00000496567 AWAT2Q6E213 333 aa18.29■□□□□ 0.52
C9orf3-222ENST00000496567 DNM1P46Q6ZS02 220 aa18.29■□□□□ 0.52
C9orf3-222ENST00000496567 C10orf105Q8TEF2 133 aa18.29■□□□□ 0.52
C9orf3-222ENST00000496567 NRIP2Q9BQI9 281 aa18.29■□□□□ 0.52
C9orf3-222ENST00000496567 ING4Q9UNL4 249 aa18.29■□□□□ 0.52
C9orf3-222ENST00000496567 PPIAL4AQ9Y536 164 aa18.29■□□□□ 0.52
C9orf3-222ENST00000496567 NOTOA8MTQ0 251 aa18.28■□□□□ 0.52
C9orf3-222ENST00000496567 SLC17A2O00624 439 aa18.28■□□□□ 0.52
C9orf3-222ENST00000496567 KDM4BO94953 1096 aa18.28■□□□□ 0.52
C9orf3-222ENST00000496567 IL1AP01583 271 aa18.28■□□□□ 0.52
C9orf3-222ENST00000496567 HTR2CP28335 458 aa18.28■□□□□ 0.52
C9orf3-222ENST00000496567 ERVK11-1P61568 191 aa18.28■□□□□ 0.52
C9orf3-222ENST00000496567 BTG1P62324 171 aa18.28■□□□□ 0.52
C9orf3-222ENST00000496567 HNRNPA0Q13151 305 aaKnown RBP18.28■□□□□ 0.52
C9orf3-222ENST00000496567 RSU1Q15404 277 aa18.28■□□□□ 0.52
C9orf3-222ENST00000496567 ASCL4Q6XD76 172 aa18.28■□□□□ 0.52
C9orf3-222ENST00000496567 OR4D6Q8NGJ1 314 aa18.28■□□□□ 0.52
C9orf3-222ENST00000496567 C12orf43Q96C57 262 aaKnown RBP18.28■□□□□ 0.52
C9orf3-222ENST00000496567 METTL9Q9H1A3 318 aa18.28■□□□□ 0.52
C9orf3-222ENST00000496567 ELL3Q9HB65 397 aaPredicted RBP18.28■□□□□ 0.52
C9orf3-222ENST00000496567 PCDHB16Q9NRJ7 776 aa18.28■□□□□ 0.52
C9orf3-222ENST00000496567 GHRLQ9UBU3 117 aa18.28■□□□□ 0.52
C9orf3-222ENST00000496567 IGKV1-12A0A0C4DH73 117 aa18.27■□□□□ 0.52
C9orf3-222ENST00000496567 H3BMQ9 156 aa18.27■□□□□ 0.52
C9orf3-222ENST00000496567 SLC22A1O15245 554 aa18.27■□□□□ 0.52
C9orf3-222ENST00000496567 ZNF780AO75290 641 aaPredicted RBP18.27■□□□□ 0.52
C9orf3-222ENST00000496567 NXPH2O95156 264 aa18.27■□□□□ 0.52
C9orf3-222ENST00000496567 IGKV1D-12P01611 117 aa18.27■□□□□ 0.52
C9orf3-222ENST00000496567 EGR1P18146 543 aa18.27■□□□□ 0.52
C9orf3-222ENST00000496567 RBMXP38159 391 aaKnown RBP18.27■□□□□ 0.52
C9orf3-222ENST00000496567 SERPINB10P48595 397 aa18.27■□□□□ 0.52
C9orf3-222ENST00000496567 ART1P52961 327 aa18.27■□□□□ 0.52
C9orf3-222ENST00000496567 OR10A3P58181 314 aa18.27■□□□□ 0.52
C9orf3-222ENST00000496567 GPR176Q14439 515 aa18.27■□□□□ 0.52
C9orf3-222ENST00000496567 GLIPR1L1Q6UWM5 242 aa18.27■□□□□ 0.52
C9orf3-222ENST00000496567 C1QL2Q7Z5L3 287 aa18.27■□□□□ 0.52
C9orf3-222ENST00000496567 ZNF488Q96MN9 340 aa18.27■□□□□ 0.52
C9orf3-222ENST00000496567 IL36GQ9NZH8 169 aa18.27■□□□□ 0.52
C9orf3-222ENST00000496567 DNAJB11Q9UBS4 358 aa18.27■□□□□ 0.52
C9orf3-222ENST00000496567 WIPI2Q9Y4P8 454 aa18.27■□□□□ 0.52
C9orf3-222ENST00000496567 TRAV38-1A0A0B4J264 116 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 OOEPA6NGQ2 149 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 IFITM5A6NNB3 132 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 ZNF701M0R085 212 aaPredicted RBP18.26■□□□□ 0.51
C9orf3-222ENST00000496567 LGALS8O00214 317 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 UBBP0CG47 229 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 MUC1P15941 1255 aaPredicted RBP18.26■□□□□ 0.51
C9orf3-222ENST00000496567 BCL3P20749 454 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 CD80P33681 288 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 BMXP51813 675 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 GMFBP60983 142 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 KCNJ8Q15842 424 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 RAB11BQ15907 218 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 MICBQ29980 383 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 SMIM21Q3B7S5 101 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 FAM201AQ5SY85 155 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 TEX36Q5VZQ5 186 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 FAM166AQ6J272 317 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 USP43Q70EL4 1123 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 FAM90A1Q86YD7 464 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 TBC1D15Q8TC07 691 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 HES4Q9HCC6 221 aa18.26■□□□□ 0.51
C9orf3-222ENST00000496567 C3orf80F5H4A9 247 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 AIPO00170 330 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 WNT9BO14905 357 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 ZNF205O95201 554 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 IGHV2-70P01814 119 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 CSTBP04080 98 aaKnown RBP18.25■□□□□ 0.51
C9orf3-222ENST00000496567 CLEC2LP0C7M8 214 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 CFPP27918 469 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 RPS19P39019 145 aaKnown RBP18.25■□□□□ 0.51
C9orf3-222ENST00000496567 MDH2P40926 338 aaKnown RBP18.25■□□□□ 0.51
C9orf3-222ENST00000496567 NPBWR2P48146 333 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 CNPY1Q3B7I2 92 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 SFRP4Q6FHJ7 346 aaPredicted RBP18.25■□□□□ 0.51
C9orf3-222ENST00000496567 ACP7Q6ZNF0 438 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 NR2C2APQ86WQ0 139 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 CROCCP3Q8IVE0 287 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 MUC20Q8N307 709 aaPredicted RBP18.25■□□□□ 0.51
C9orf3-222ENST00000496567 BPESC1Q9GZL8 116 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 WDR13Q9H1Z4 485 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 STEAP1Q9UHE8 339 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 A0A0G2JK05 382 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 SMIM30A4D0T7 59 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 ISPDA4D126 451 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP18.25■□□□□ 0.51
C9orf3-222ENST00000496567 SFTPBP07988 381 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 SLC25A16P16260 332 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 CAPZA1P52907 286 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 ZMYND11Q15326 602 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 AVPI1Q5T686 147 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 HES5Q5TA89 166 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 ELP2Q6IA86 826 aa18.25■□□□□ 0.51
C9orf3-222ENST00000496567 SFXN4Q6P4A7 337 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms