RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 POLDIP2Q9Y2S7 368 aa11.65□□□□□ -0.54
VTI1A-209ENST00000496445 CAB39Q9Y376 341 aaPredicted RBP11.65□□□□□ -0.54
VTI1A-209ENST00000496445 RNF114Q9Y508 228 aa11.65□□□□□ -0.54
VTI1A-209ENST00000496445 IGKV1-27A0A075B6S5 117 aa11.64□□□□□ -0.55
VTI1A-209ENST00000496445 METTL15A6NJ78 407 aa11.64□□□□□ -0.55
VTI1A-209ENST00000496445 SLC1A7O00341 560 aa11.64□□□□□ -0.55
VTI1A-209ENST00000496445 NXPH2O95156 264 aa11.64□□□□□ -0.55
VTI1A-209ENST00000496445 PRDX2P32119 198 aa11.64□□□□□ -0.55
VTI1A-209ENST00000496445 KIR3DL2P43630 455 aa11.64□□□□□ -0.55
VTI1A-209ENST00000496445 PROK1P58294 105 aa11.64□□□□□ -0.55
VTI1A-209ENST00000496445 ZNF273Q14593 569 aa11.64□□□□□ -0.55
VTI1A-209ENST00000496445 UBE2V2Q15819 145 aa11.64□□□□□ -0.55
VTI1A-209ENST00000496445 ANGPTL5Q86XS5 388 aa11.64□□□□□ -0.55
VTI1A-209ENST00000496445 MKXQ8IYA7 352 aa11.64□□□□□ -0.55
VTI1A-209ENST00000496445 ZSCAN4Q8NAM6 433 aaPredicted RBP11.64□□□□□ -0.55
VTI1A-209ENST00000496445 OR8J1Q8NGP2 316 aa11.64□□□□□ -0.55
VTI1A-209ENST00000496445 PYDC1Q8WXC3 89 aa11.64□□□□□ -0.55
VTI1A-209ENST00000496445 PKIBQ9C010 78 aa11.64□□□□□ -0.55
VTI1A-209ENST00000496445 OR14J1Q9UGF5 321 aa11.64□□□□□ -0.55
VTI1A-209ENST00000496445 LOC107986453A0A1B0GWG9 222 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 E9PQ18 207 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 F8VVB4 439 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 F8VWA3 439 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 H0YAE9 185 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 SYT7O43581 403 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 ANGPTL7O43827 346 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 CIB2O75838 187 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 SULT1C4O75897 302 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 CLPXO76031 633 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 PAHP00439 452 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 ERVFRD-1P60508 538 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 RPL31P62899 125 aaKnown RBP11.63□□□□□ -0.55
VTI1A-209ENST00000496445 ACSM1Q08AH1 577 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 IL24Q13007 206 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 TMED1Q13445 227 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 BLMHQ13867 455 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 TP53I3Q53FA7 332 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 TMEM200BQ69YZ2 307 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 DHRS7BQ6IAN0 325 aaPredicted RBP11.63□□□□□ -0.55
VTI1A-209ENST00000496445 BEND2Q8NDZ0 799 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 OR5D13Q8NGL4 314 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 UBE2FQ969M7 185 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 RBM4BQ9BQ04 359 aaKnown RBP11.63□□□□□ -0.55
VTI1A-209ENST00000496445 CHST5Q9GZS9 411 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 C16orf95Q9H693 158 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 PLEKHA1Q9HB21 404 aa11.63□□□□□ -0.55
VTI1A-209ENST00000496445 TGP01266 2768 aa11.62□□□□□ -0.55
VTI1A-209ENST00000496445 FAM230AA0A1W2PPH8 454 aa11.62□□□□□ -0.55
VTI1A-209ENST00000496445 BTBD17A6NE02 478 aa11.62□□□□□ -0.55
VTI1A-209ENST00000496445 H3BNX3 289 aa11.62□□□□□ -0.55
VTI1A-209ENST00000496445 TK1P04183 234 aa11.62□□□□□ -0.55
VTI1A-209ENST00000496445 ALPLP05186 524 aa11.62□□□□□ -0.55
VTI1A-209ENST00000496445 CCL3L1P16619 93 aa11.62□□□□□ -0.55
VTI1A-209ENST00000496445 PAX6P26367 422 aa11.62□□□□□ -0.55
VTI1A-209ENST00000496445 CDC42P60953 191 aa11.62□□□□□ -0.55
VTI1A-209ENST00000496445 OR4M1Q8NGD0 313 aa11.62□□□□□ -0.55
VTI1A-209ENST00000496445 OR5R1Q8NH85 324 aa11.62□□□□□ -0.55
VTI1A-209ENST00000496445 MTCH1Q9NZJ7 389 aa11.62□□□□□ -0.55
VTI1A-209ENST00000496445 SF3B6Q9Y3B4 125 aaKnown RBP11.62□□□□□ -0.55
VTI1A-209ENST00000496445 MEGF11A6BM72 1044 aa11.61□□□□□ -0.55
VTI1A-209ENST00000496445 H3BUX3 64 aa11.61□□□□□ -0.55
VTI1A-209ENST00000496445 J3QRE1 110 aa11.61□□□□□ -0.55
VTI1A-209ENST00000496445 EI24O14681 340 aa11.61□□□□□ -0.55
VTI1A-209ENST00000496445 ENTPD6O75354 484 aa11.61□□□□□ -0.55
VTI1A-209ENST00000496445 ZNF737O75373 536 aa11.61□□□□□ -0.55
VTI1A-209ENST00000496445 TSPAN9O75954 239 aa11.61□□□□□ -0.55
VTI1A-209ENST00000496445 BMXP51813 675 aa11.61□□□□□ -0.55
VTI1A-209ENST00000496445 DLX6P56179 175 aa11.61□□□□□ -0.55
VTI1A-209ENST00000496445 MIDNQ504T8 468 aa11.61□□□□□ -0.55
VTI1A-209ENST00000496445 ASPHD2Q6ICH7 369 aa11.61□□□□□ -0.55
VTI1A-209ENST00000496445 RDH10Q8IZV5 341 aa11.61□□□□□ -0.55
VTI1A-209ENST00000496445 RFKQ969G6 155 aa11.61□□□□□ -0.55
VTI1A-209ENST00000496445 SLAMF9Q96A28 289 aa11.61□□□□□ -0.55
VTI1A-209ENST00000496445 FAM234AQ9H0X4 552 aa11.61□□□□□ -0.55
VTI1A-209ENST00000496445 USE1Q9NZ43 259 aa11.61□□□□□ -0.55
VTI1A-209ENST00000496445 IL36RNQ9UBH0 155 aa11.61□□□□□ -0.55
VTI1A-209ENST00000496445 GNG8Q9UK08 70 aa11.61□□□□□ -0.55
VTI1A-209ENST00000496445 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.61□□□□□ -0.55
VTI1A-209ENST00000496445 SLC7A11Q9UPY5 501 aa11.61□□□□□ -0.55
VTI1A-209ENST00000496445 K7N7A8 449 aa11.6□□□□□ -0.55
VTI1A-209ENST00000496445 GATBO75879 557 aaKnown RBP11.6□□□□□ -0.55
VTI1A-209ENST00000496445 UBCP0CG48 685 aaKnown RBP11.6□□□□□ -0.55
VTI1A-209ENST00000496445 PIPP12273 146 aaPredicted RBP11.6□□□□□ -0.55
VTI1A-209ENST00000496445 COX7A1P24310 79 aa11.6□□□□□ -0.55
VTI1A-209ENST00000496445 ATP6V1E1P36543 226 aa11.6□□□□□ -0.55
VTI1A-209ENST00000496445 NANOS3P60323 173 aaKnown RBP11.6□□□□□ -0.55
VTI1A-209ENST00000496445 COL10A1Q03692 680 aa11.6□□□□□ -0.55
VTI1A-209ENST00000496445 KPNB1Q14974 876 aaKnown RBP11.6□□□□□ -0.55
VTI1A-209ENST00000496445 OCLNQ16625 522 aa11.6□□□□□ -0.55
VTI1A-209ENST00000496445 CRIP3Q6Q6R5 217 aa11.6□□□□□ -0.55
VTI1A-209ENST00000496445 ZNF782Q6ZMW2 699 aaPredicted RBP11.6□□□□□ -0.55
VTI1A-209ENST00000496445 TCF23Q7RTU1 214 aa11.6□□□□□ -0.55
VTI1A-209ENST00000496445 FAM220AQ7Z4H9 259 aa11.6□□□□□ -0.55
VTI1A-209ENST00000496445 CCDC54Q8NEL0 328 aa11.6□□□□□ -0.55
VTI1A-209ENST00000496445 PPP1R35Q8TAP8 253 aa11.6□□□□□ -0.55
VTI1A-209ENST00000496445 RNFT2Q96EX2 444 aa11.6□□□□□ -0.55
VTI1A-209ENST00000496445 ADAT3Q96EY9 351 aaPredicted RBP11.6□□□□□ -0.55
VTI1A-209ENST00000496445 HRASLS5Q96KN8 279 aa11.6□□□□□ -0.55
VTI1A-209ENST00000496445 CEP19Q96LK0 163 aa11.6□□□□□ -0.55
VTI1A-209ENST00000496445 IMPAD1Q9NX62 359 aa11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms