RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 ELOVL3Q9HB03 270 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 CAPN10Q9HC96 672 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 GPR84Q9NQS5 396 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 AURKAIP1Q9NWT8 199 aaPredicted RBP7.99□□□□□ -1.13
HPS4-217ENST00000496385 LSM5Q9Y4Y9 91 aaKnown RBP7.99□□□□□ -1.13
HPS4-217ENST00000496385 KMT2EQ8IZD2 1858 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 ABCA7Q8IZY2 2146 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 B4E171 279 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 SCGB1D1O95968 90 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 GABRG2P18507 467 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 KLK2P20151 261 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 GALNSP34059 522 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 CDK3Q00526 305 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 PLAURQ03405 335 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 PMS2P11Q13670 270 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 LPAL2Q16609 132 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 PCK2Q16822 640 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 HYAL4Q2M3T9 481 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 HNRNPA1L2Q32P51 320 aaKnown RBP7.99□□□□□ -1.13
HPS4-217ENST00000496385 SLC22A6Q4U2R8 563 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 SYT13Q7L8C5 426 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 GBGT1Q8N5D6 347 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 LRRC75AQ8NAA5 344 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 RNASE8Q8TDE3 154 aaKnown RBP7.99□□□□□ -1.13
HPS4-217ENST00000496385 THOC3Q96J01 351 aaKnown RBP7.99□□□□□ -1.13
HPS4-217ENST00000496385 MRGPRX1Q96LB2 322 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 P2RX4Q99571 388 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.99□□□□□ -1.13
HPS4-217ENST00000496385 PADI1Q9ULC6 663 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 PLAGL1Q9UM63 463 aa7.99□□□□□ -1.13
HPS4-217ENST00000496385 EML5Q05BV3 1969 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 K7ESF4 209 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 CA11O75493 328 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 C1QL1O75973 258 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 MBPP02686 304 aaPredicted RBP7.98□□□□□ -1.13
HPS4-217ENST00000496385 SLC37A1P57057 533 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 FHL5Q5TD97 284 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 SLC18B1Q6NT16 456 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 PLXDC2Q6UX71 529 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 NUP54Q7Z3B4 507 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 ZNF100Q8IYN0 542 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 CLDND2Q8NHS1 167 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 CORO2AQ92828 525 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 BTF3L4Q96K17 158 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 NKX3-1Q99801 234 aaPredicted RBP7.98□□□□□ -1.13
HPS4-217ENST00000496385 GABRG3Q99928 467 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 PCGF1Q9BSM1 259 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 TBL1XR1Q9BZK7 514 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 PLK3Q9H4B4 646 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 SDF2L1Q9HCN8 221 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 DNAJB12Q9NXW2 375 aaKnown RBP7.98□□□□□ -1.13
HPS4-217ENST00000496385 SERGEFQ9UGK8 458 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 LIPGQ9Y5X9 500 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 R4GN57 208 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 GPR179Q6PRD1 2367 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 PFN1P07737 140 aaKnown RBP7.98□□□□□ -1.13
HPS4-217ENST00000496385 ZNF43P17038 809 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 RAB7AP51149 207 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 VAMP2P63027 116 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 CCL20P78556 96 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 ATP6V1FQ16864 119 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 ZNF66Q6ZN08 573 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 CENPVQ7Z7K6 275 aaPredicted RBP7.98□□□□□ -1.13
HPS4-217ENST00000496385 SLC22A24Q8N4F4 322 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 C11orf42Q8N5U0 333 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 OR4D6Q8NGJ1 314 aa7.98□□□□□ -1.13
HPS4-217ENST00000496385 GNPNAT1Q96EK6 184 aaPredicted RBP7.98□□□□□ -1.13
HPS4-217ENST00000496385 SRA1Q9HD15 236 aaKnown RBP7.98□□□□□ -1.13
HPS4-217ENST00000496385 NSG1A0A0A6YYJ2 146 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 TRAV39A0A0B4J263 110 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 A8MVM7 634 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 TMEM14DPA8MWL7 114 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 LCATP04180 440 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 MMP7P09237 267 aaPredicted RBP7.97□□□□□ -1.13
HPS4-217ENST00000496385 GNB3P16520 340 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 BCL6P41182 706 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 UNC119Q13432 240 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 MEP1BQ16820 701 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 ZNF547Q8IVP9 402 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 OR2G3Q8NGZ4 309 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 HAS2Q92819 552 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 TSLPQ969D9 159 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 NKD1Q969G9 470 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 SH3BGRL3Q9H299 93 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 C6orf106Q9H6K1 298 aaPredicted RBP7.97□□□□□ -1.13
HPS4-217ENST00000496385 AK3Q9UIJ7 227 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 SLC22A13Q9Y226 551 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 SLC5A6Q9Y289 635 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 HEATR5AQ86XA9 2040 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 HEATR5BQ9P2D3 2071 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 ZFHX2Q9C0A1 2572 aaPredicted RBP7.97□□□□□ -1.13
HPS4-217ENST00000496385 EDDM13A0A1B0GTR0 161 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 LOC102723971A0A1B0GUV8 181 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 A0A1W2PP55 124 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 ZNF732B4DXR9 585 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 C4orf51C9J302 202 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 TYMSP04818 313 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 CTSDP07339 412 aaPredicted RBP7.97□□□□□ -1.13
HPS4-217ENST00000496385 GLRA1P23415 457 aa7.97□□□□□ -1.13
HPS4-217ENST00000496385 PSMB5P28074 263 aa7.97□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms